Click here to switch to the map view.

The map label for this gene is dgoK [H]

Identifier: 182679784

GI number: 182679784

Start: 3277820

End: 3278794

Strand: Reverse

Name: dgoK [H]

Synonym: Bind_2872

Alternate gene names: 182679784

Gene position: 3278794-3277820 (Counterclockwise)

Preceding gene: 182679785

Following gene: 182679783

Centisome position: 78.63

GC content: 57.95

Gene sequence:

>975_bases
ATGATCCATGCAAGGGAGCCTTTCGTCGTCGCGGTGGACTGGGGAACCTCCAGTCTGCGGCTTTGGGTCCTGGCCCCTGA
CGGCACTATTCTGGCGCATCGGCGCTCTTGCGAGGGCATGAACCAAATTTCCACCGGCGGCTTCGAAACGATTTTGCGCC
AGCACCTTGCGCAATTTGCAGAGGATCTCGGAATAACAGGCTGGCCCGAGCCTGTGCCCGTCATCTGTTGCGGTATGGTT
GGGGCGCGGCAGGGATGGCGGGAAGCGGCCTATCTAACTGTCCCGCAAAAACTCGAGGCTTTGATCGAGGCGGCGATTGT
CTTGACCCCTTCCGGTCTCGATGTGCGCATTCTTCCAGGGCTGGCTTGCGATGACCCGCGCCATCCAGATGTCATGCGGG
GCGAGGAAACCCAATTGCTTGGCCTGATCTGCGAGGAGGATGCTGTCTCCGGCTGGGTTTGTTTGCCTGGCACGCATACG
AAATGGGCCTTGCTCGAGCATGGCGAGATCACGACCTTCACGACGGCGATCAGTGGTGAATTGTTCGGGCTTTTATCCAA
GCACAGCATTTTGCGCCATACGATTGGACAGGCTTCGGCGAGCAATGAACCCTCACCAGCGTTCCGGCTGGGACTGAGCG
AGGGGCAGTCCGATCCAGGAAAATTGGTTTCGACCTTATTTTCCCTGCGGGCGCGGCATCTTCTCTTCTCACAATCGGAG
AAGGAGGCCGCGGATTGGCTTTCCGGGCTTTTGATCGGCTGTGAAACCGCTGCCGTTTTGAAGGATATCGGGCAAGCTAC
TGTGGTGACGCTCGTCACGGATGACAAATTCCAAGCTCTCTATACGGAAGCGATCACGGCGATGGAACATGAAGTCCGCT
TTTTCGACGCCGATCGCGCTGTATGCGCCGGGCTTTTTCATGCCGCGCGCCACATTTGGCCGGCCCTTCAAACGGAAAGG
GTACTCTTCCCATGA

Upstream 100 bases:

>100_bases
AACGCCTTAGGGAAGTATGAGAGTGAATTGACAAAAGGGCAGGGAATAGTTCATTTTAACAAAACTTAGTTCTGTTCAAT
GGAACGTTGAGATTCCAGCC

Downstream 100 bases:

>100_bases
CGGAAACTGTGACGCACACACATCCAGACTCCCTACCGAAGCAGGTGCCCTGGCCGAAACTCAAACGTAATCTCGTTGCG
ATCTTGCGCGGCATCAAGCC

Product: 2-keto-3-deoxy-galactonokinase

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MIHAREPFVVAVDWGTSSLRLWVLAPDGTILAHRRSCEGMNQISTGGFETILRQHLAQFAEDLGITGWPEPVPVICCGMV
GARQGWREAAYLTVPQKLEALIEAAIVLTPSGLDVRILPGLACDDPRHPDVMRGEETQLLGLICEEDAVSGWVCLPGTHT
KWALLEHGEITTFTTAISGELFGLLSKHSILRHTIGQASASNEPSPAFRLGLSEGQSDPGKLVSTLFSLRARHLLFSQSE
KEAADWLSGLLIGCETAAVLKDIGQATVVTLVTDDKFQALYTEAITAMEHEVRFFDADRAVCAGLFHAARHIWPALQTER
VLFP

Sequences:

>Translated_324_residues
MIHAREPFVVAVDWGTSSLRLWVLAPDGTILAHRRSCEGMNQISTGGFETILRQHLAQFAEDLGITGWPEPVPVICCGMV
GARQGWREAAYLTVPQKLEALIEAAIVLTPSGLDVRILPGLACDDPRHPDVMRGEETQLLGLICEEDAVSGWVCLPGTHT
KWALLEHGEITTFTTAISGELFGLLSKHSILRHTIGQASASNEPSPAFRLGLSEGQSDPGKLVSTLFSLRARHLLFSQSE
KEAADWLSGLLIGCETAAVLKDIGQATVVTLVTDDKFQALYTEAITAMEHEVRFFDADRAVCAGLFHAARHIWPALQTER
VLFP
>Mature_324_residues
MIHAREPFVVAVDWGTSSLRLWVLAPDGTILAHRRSCEGMNQISTGGFETILRQHLAQFAEDLGITGWPEPVPVICCGMV
GARQGWREAAYLTVPQKLEALIEAAIVLTPSGLDVRILPGLACDDPRHPDVMRGEETQLLGLICEEDAVSGWVCLPGTHT
KWALLEHGEITTFTTAISGELFGLLSKHSILRHTIGQASASNEPSPAFRLGLSEGQSDPGKLVSTLFSLRARHLLFSQSE
KEAADWLSGLLIGCETAAVLKDIGQATVVTLVTDDKFQALYTEAITAMEHEVRFFDADRAVCAGLFHAARHIWPALQTER
VLFP

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=297, Percent_Identity=32.996632996633, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 35310; Mature: 35310

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHAREPFVVAVDWGTSSLRLWVLAPDGTILAHRRSCEGMNQISTGGFETILRQHLAQFA
CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
EDLGITGWPEPVPVICCGMVGARQGWREAAYLTVPQKLEALIEAAIVLTPSGLDVRILPG
HHCCCCCCCCCHHHEECCHHHHCCCCCCCEEEECHHHHHHHHHHHEEECCCCCCEEEECC
LACDDPRHPDVMRGEETQLLGLICEEDAVSGWVCLPGTHTKWALLEHGEITTFTTAISGE
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCEEEEEECCCEEEEEEHHHHH
LFGLLSKHSILRHTIGQASASNEPSPAFRLGLSEGQSDPGKLVSTLFSLRARHLLFSQSE
HHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCH
KEAADWLSGLLIGCETAAVLKDIGQATVVTLVTDDKFQALYTEAITAMEHEVRFFDADRA
HHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHEEEECHHH
VCAGLFHAARHIWPALQTERVLFP
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIHAREPFVVAVDWGTSSLRLWVLAPDGTILAHRRSCEGMNQISTGGFETILRQHLAQFA
CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
EDLGITGWPEPVPVICCGMVGARQGWREAAYLTVPQKLEALIEAAIVLTPSGLDVRILPG
HHCCCCCCCCCHHHEECCHHHHCCCCCCCEEEECHHHHHHHHHHHEEECCCCCCEEEECC
LACDDPRHPDVMRGEETQLLGLICEEDAVSGWVCLPGTHTKWALLEHGEITTFTTAISGE
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCEEEEEECCCEEEEEEHHHHH
LFGLLSKHSILRHTIGQASASNEPSPAFRLGLSEGQSDPGKLVSTLFSLRARHLLFSQSE
HHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCH
KEAADWLSGLLIGCETAAVLKDIGQATVVTLVTDDKFQALYTEAITAMEHEVRFFDADRA
HHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHEEEECHHH
VCAGLFHAARHIWPALQTERVLFP
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]