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The map label for this gene is yagI [H]

Identifier: 182679785

GI number: 182679785

Start: 3278899

End: 3279708

Strand: Reverse

Name: yagI [H]

Synonym: Bind_2873

Alternate gene names: 182679785

Gene position: 3279708-3278899 (Counterclockwise)

Preceding gene: 182679789

Following gene: 182679784

Centisome position: 78.65

GC content: 53.7

Gene sequence:

>810_bases
ATGACGAATGCGGTCGATAAACAAAACGATATGAGCAGCCCGATCACGAAAGCGCTGCATCTTCTCGATATTGTCGCCTC
CTTTGAGAGACCGGCGCGATTTTCAGAAATTCAGCAGATTGCCGGCCTGTCCAAGGCGACATTGCACCGCTTGTTGAAAC
AGCTCGAAGCTGAACGCATGTTGTCATTTGATGAGGAGGCGCAGCGTTATCATCTTGGGCTTCGCCTGATCCGCCTGGCG
CATGGGGCTTGGGAAACAGCATCCTTGGCCGCGGTCGCGCGTCCGATGCTCGACCGACTCGCGGAAAAGCTCGGCTTGAC
GATTCATCTTGGTTGTCTTGAGGGCGATCAGGTTCTCTATCTGGACAAACGCACGGCCAAATCGTCCGTGCGGATGTTTT
CATCACCGGGACGTGTGGCGCCTCTCCATTGCACGGGCCTTGGCAAGGCCATGCTGGCCTATCTCGATGCGAAGCAGAAA
GACACTATTGTCGGACGACTGAGCATGAAGCCATTTACCGATAAAACGATCACGAAACGCCAGGATCTTTTGAAAAATCT
GGCGGAAATTAGAAGGGTCGGATTTGCCATCGATGATCAGGAACATGAGCCTTCCATCATCTGCCTTGCTGTTCCGATCC
TTGGCCGGAATGGGGCGATGATCGGCGCTCTCTCGACGACTTCGACGACTTATCAGCATGATTTGGAGGGTCTGAAAGCT
TTTTATGAGGATTTGCATGGCGCGGCCCAAACGATTGCGCGCGATGCGGAAGTGCAATTTCTGGCGCAGAAGCAATCTGG
CCCGCGATAA

Upstream 100 bases:

>100_bases
TGATTGATAAGCCGCAATGTTCGGCAAGTCAATGCTATTGGATCCGCTCCTGATGTGAAACCTTGCGAAGGGCGGAGACA
CGAGAACGAGCCAAGTTATC

Downstream 100 bases:

>100_bases
AGCAAACGCCTTAGGGAAGTATGAGAGTGAATTGACAAAAGGGCAGGGAATAGTTCATTTTAACAAAACTTAGTTCTGTT
CAATGGAACGTTGAGATTCC

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTNAVDKQNDMSSPITKALHLLDIVASFERPARFSEIQQIAGLSKATLHRLLKQLEAERMLSFDEEAQRYHLGLRLIRLA
HGAWETASLAAVARPMLDRLAEKLGLTIHLGCLEGDQVLYLDKRTAKSSVRMFSSPGRVAPLHCTGLGKAMLAYLDAKQK
DTIVGRLSMKPFTDKTITKRQDLLKNLAEIRRVGFAIDDQEHEPSIICLAVPILGRNGAMIGALSTTSTTYQHDLEGLKA
FYEDLHGAAQTIARDAEVQFLAQKQSGPR

Sequences:

>Translated_269_residues
MTNAVDKQNDMSSPITKALHLLDIVASFERPARFSEIQQIAGLSKATLHRLLKQLEAERMLSFDEEAQRYHLGLRLIRLA
HGAWETASLAAVARPMLDRLAEKLGLTIHLGCLEGDQVLYLDKRTAKSSVRMFSSPGRVAPLHCTGLGKAMLAYLDAKQK
DTIVGRLSMKPFTDKTITKRQDLLKNLAEIRRVGFAIDDQEHEPSIICLAVPILGRNGAMIGALSTTSTTYQHDLEGLKA
FYEDLHGAAQTIARDAEVQFLAQKQSGPR
>Mature_268_residues
TNAVDKQNDMSSPITKALHLLDIVASFERPARFSEIQQIAGLSKATLHRLLKQLEAERMLSFDEEAQRYHLGLRLIRLAH
GAWETASLAAVARPMLDRLAEKLGLTIHLGCLEGDQVLYLDKRTAKSSVRMFSSPGRVAPLHCTGLGKAMLAYLDAKQKD
TIVGRLSMKPFTDKTITKRQDLLKNLAEIRRVGFAIDDQEHEPSIICLAVPILGRNGAMIGALSTTSTTYQHDLEGLKAF
YEDLHGAAQTIARDAEVQFLAQKQSGPR

Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=254, Percent_Identity=32.2834645669291, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1786468, Length=240, Percent_Identity=30.8333333333333, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1788581, Length=241, Percent_Identity=30.7053941908714, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789999, Length=268, Percent_Identity=26.1194029850746, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI87082359, Length=215, Percent_Identity=26.9767441860465, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786715, Length=210, Percent_Identity=27.6190476190476, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1790752, Length=185, Percent_Identity=29.1891891891892, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 29772; Mature: 29641

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAVDKQNDMSSPITKALHLLDIVASFERPARFSEIQQIAGLSKATLHRLLKQLEAERM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LSFDEEAQRYHLGLRLIRLAHGAWETASLAAVARPMLDRLAEKLGLTIHLGCLEGDQVLY
HCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEE
LDKRTAKSSVRMFSSPGRVAPLHCTGLGKAMLAYLDAKQKDTIVGRLSMKPFTDKTITKR
EECHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHH
QDLLKNLAEIRRVGFAIDDQEHEPSIICLAVPILGRNGAMIGALSTTSTTYQHDLEGLKA
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHH
FYEDLHGAAQTIARDAEVQFLAQKQSGPR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TNAVDKQNDMSSPITKALHLLDIVASFERPARFSEIQQIAGLSKATLHRLLKQLEAERM
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LSFDEEAQRYHLGLRLIRLAHGAWETASLAAVARPMLDRLAEKLGLTIHLGCLEGDQVLY
HCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEE
LDKRTAKSSVRMFSSPGRVAPLHCTGLGKAMLAYLDAKQKDTIVGRLSMKPFTDKTITKR
EECHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHH
QDLLKNLAEIRRVGFAIDDQEHEPSIICLAVPILGRNGAMIGALSTTSTTYQHDLEGLKA
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHH
FYEDLHGAAQTIARDAEVQFLAQKQSGPR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]