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The map label for this gene is dgoA [H]

Identifier: 182679783

GI number: 182679783

Start: 3277140

End: 3277823

Strand: Reverse

Name: dgoA [H]

Synonym: Bind_2871

Alternate gene names: 182679783

Gene position: 3277823-3277140 (Counterclockwise)

Preceding gene: 182679784

Following gene: 182679782

Centisome position: 78.6

GC content: 58.77

Gene sequence:

>684_bases
ATGACGGAAACTGTGACGCACACACATCCAGACTCCCTACCGAAGCAGGTGCCCTGGCCGAAACTCAAACGTAATCTCGT
TGCGATCTTGCGCGGCATCAAGCCGGATGAAGTCGAAGCCATTGGCATGGCTTTGTTCGAGGCCGGTTTCGATGCCATCG
AGGTGCCCTTGAATTCGCCGGAGCCTTTGGAATCCATCGCGCGGCTTCTCAAGCTCTTGCCGGCGCATGTCCTGATTGGT
GCGGGTACAGTCACGGAAATCGAGCAGGTCGATGCTCTCGCGGCCATTGGTGGGCGTTTGATGGTGAGCCCCAATTTCGA
CAAACGCGTCCTCCATCGCGCCGCCTCGGCCGGTCTTGTGACAATGCCCGGAATTTTTACCGCCACCGAGGCGTTCGCGG
CGATCCATCACGGCGCCTCCGCACTCAAATTTTTTCCCGCCAGCGTGCTAGGGCCGGGGGGCATCGGTGCCATTAAAACG
GTTTTGCCGAAAACGACGGTAGTCGGTGCCGTCGGTGGGGTCAGCGAGGAGCATTTTGGGGCTTATGTGGCGGTGGGTGT
CACGGCCTTCGGGCTGGGGTCGAGCCTCTACAAACCCAATATGACCCATGAGGACGTTGCACAAAGGGCGCGCCTCGCAG
TGGCAGCCTATGATCAGGTTTTCAATGCCCATATGTTTGCCTGA

Upstream 100 bases:

>100_bases
AAGTCCGCTTTTTCGACGCCGATCGCGCTGTATGCGCCGGGCTTTTTCATGCCGCGCGCCACATTTGGCCGGCCCTTCAA
ACGGAAAGGGTACTCTTCCC

Downstream 100 bases:

>100_bases
TCAAAGGGAACTTTGCGCGCCACGTCCCAATGTTGAACGACCGATCTTTTCCCTTCTCAGGTCGTATCATTTTCACTGTT
TCATGAGCTGCCCCCAGTCT

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTETVTHTHPDSLPKQVPWPKLKRNLVAILRGIKPDEVEAIGMALFEAGFDAIEVPLNSPEPLESIARLLKLLPAHVLIG
AGTVTEIEQVDALAAIGGRLMVSPNFDKRVLHRAASAGLVTMPGIFTATEAFAAIHHGASALKFFPASVLGPGGIGAIKT
VLPKTTVVGAVGGVSEEHFGAYVAVGVTAFGLGSSLYKPNMTHEDVAQRARLAVAAYDQVFNAHMFA

Sequences:

>Translated_227_residues
MTETVTHTHPDSLPKQVPWPKLKRNLVAILRGIKPDEVEAIGMALFEAGFDAIEVPLNSPEPLESIARLLKLLPAHVLIG
AGTVTEIEQVDALAAIGGRLMVSPNFDKRVLHRAASAGLVTMPGIFTATEAFAAIHHGASALKFFPASVLGPGGIGAIKT
VLPKTTVVGAVGGVSEEHFGAYVAVGVTAFGLGSSLYKPNMTHEDVAQRARLAVAAYDQVFNAHMFA
>Mature_226_residues
TETVTHTHPDSLPKQVPWPKLKRNLVAILRGIKPDEVEAIGMALFEAGFDAIEVPLNSPEPLESIARLLKLLPAHVLIGA
GTVTEIEQVDALAAIGGRLMVSPNFDKRVLHRAASAGLVTMPGIFTATEAFAAIHHGASALKFFPASVLGPGGIGAIKTV
LPKTTVVGAVGGVSEEHFGAYVAVGVTAFGLGSSLYKPNMTHEDVAQRARLAVAAYDQVFNAHMFA

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=199, Percent_Identity=47.7386934673367, Blast_Score=172, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 23847; Mature: 23716

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00160 ALDOLASE_KDPG_KHG_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETVTHTHPDSLPKQVPWPKLKRNLVAILRGIKPDEVEAIGMALFEAGFDAIEVPLNSP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCC
EPLESIARLLKLLPAHVLIGAGTVTEIEQVDALAAIGGRLMVSPNFDKRVLHRAASAGLV
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCE
TMPGIFTATEAFAAIHHGASALKFFPASVLGPGGIGAIKTVLPKTTVVGAVGGVSEEHFG
ECCCHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCHHHHHHHHCHHHHHHHHCCCCHHHHC
AYVAVGVTAFGLGSSLYKPNMTHEDVAQRARLAVAAYDQVFNAHMFA
HHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TETVTHTHPDSLPKQVPWPKLKRNLVAILRGIKPDEVEAIGMALFEAGFDAIEVPLNSP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCC
EPLESIARLLKLLPAHVLIGAGTVTEIEQVDALAAIGGRLMVSPNFDKRVLHRAASAGLV
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCE
TMPGIFTATEAFAAIHHGASALKFFPASVLGPGGIGAIKTVLPKTTVVGAVGGVSEEHFG
ECCCHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCHHHHHHHHCHHHHHHHHCCCCHHHHC
AYVAVGVTAFGLGSSLYKPNMTHEDVAQRARLAVAAYDQVFNAHMFA
HHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]