| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679634
Identifier: 182679634
GI number: 182679634
Start: 3098154
End: 3098600
Strand: Reverse
Name: 182679634
Synonym: Bind_2719
Alternate gene names: NA
Gene position: 3098600-3098154 (Counterclockwise)
Preceding gene: 182679635
Following gene: 182679632
Centisome position: 74.3
GC content: 59.06
Gene sequence:
>447_bases ATGGAACGCGTCAGGATTCCCCGGCAAGGCTGGATCTTGGTCTGCGACGGCGCCAAGGCGCAGATCTTGCGCAATGATGG CGAGGCGACACGGCTTGATCTCAAGCCGGTTGAAGACTTCGCCTTGCCGCAGGCGCCTGCTCGTGAACTCGGCACGGATC GGCCAGGACGCGTCTACGAATCACACGGCACATCCCGCAGCGCGCTCGAACAGACCGACTGGCATGAGCAGAACGAGATC GACTTTCTTTCGGATGTGGCTGATGTCCTTGATAAGGAGATCAAGCATTATGCCGTCAAAAGTCTCATCGTGATCGCGCC ACCGAAAGCGCTCGGCGTCTTGCGCGAACGCCTTTCACCGGCGGCGCGCGGCATTGTGACGGCTGAAATCGATAAGGATT TCATGAAATTGCCGGTCAAGGAGATCGCGGCACGGCTGTCTGCCTGA
Upstream 100 bases:
>100_bases GCGCTTTGGGGAGAACTGGAAAGCGTTTCGAACATTATCCTGATCGCGGTTGCGTCTGTGGTGTGATGACCGCGAGTTCA GAAGGATGATGGAGAGCGAC
Downstream 100 bases:
>100_bases ACTGTCAGGAGCGCCCGATGACCGCCCAGAGGGGATCGGCACCGCGCCCGCCTTTGCAAAGCGTGCGTGATTCGATCGAC GCGAAACCCGCGCGTTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Required For Attachment Host Cells; Protein Required For Attachment Host Cells-Like
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MERVRIPRQGWILVCDGAKAQILRNDGEATRLDLKPVEDFALPQAPARELGTDRPGRVYESHGTSRSALEQTDWHEQNEI DFLSDVADVLDKEIKHYAVKSLIVIAPPKALGVLRERLSPAARGIVTAEIDKDFMKLPVKEIAARLSA
Sequences:
>Translated_148_residues MERVRIPRQGWILVCDGAKAQILRNDGEATRLDLKPVEDFALPQAPARELGTDRPGRVYESHGTSRSALEQTDWHEQNEI DFLSDVADVLDKEIKHYAVKSLIVIAPPKALGVLRERLSPAARGIVTAEIDKDFMKLPVKEIAARLSA >Mature_148_residues MERVRIPRQGWILVCDGAKAQILRNDGEATRLDLKPVEDFALPQAPARELGTDRPGRVYESHGTSRSALEQTDWHEQNEI DFLSDVADVLDKEIKHYAVKSLIVIAPPKALGVLRERLSPAARGIVTAEIDKDFMKLPVKEIAARLSA
Specific function: Unknown
COG id: COG5622
COG function: function code N; Protein required for attachment to host cells
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16492; Mature: 16492
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVRIPRQGWILVCDGAKAQILRNDGEATRLDLKPVEDFALPQAPARELGTDRPGRVYE CCCCCCCCCCEEEEECCCCEEEEECCCCEEEEECCCCHHHCCCCCCHHHHCCCCCCCEEC SHGTSRSALEQTDWHEQNEIDFLSDVADVLDKEIKHYAVKSLIVIAPPKALGVLRERLSP CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCH AARGIVTAEIDKDFMKLPVKEIAARLSA HHCCCEEECCCHHHHHCCHHHHHHHHCC >Mature Secondary Structure MERVRIPRQGWILVCDGAKAQILRNDGEATRLDLKPVEDFALPQAPARELGTDRPGRVYE CCCCCCCCCCEEEEECCCCEEEEECCCCEEEEECCCCHHHCCCCCCHHHHCCCCCCCEEC SHGTSRSALEQTDWHEQNEIDFLSDVADVLDKEIKHYAVKSLIVIAPPKALGVLRERLSP CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCH AARGIVTAEIDKDFMKLPVKEIAARLSA HHCCCEEECCCHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA