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The map label for this gene is slyA [C]

Identifier: 182679176

GI number: 182679176

Start: 2538425

End: 2538898

Strand: Direct

Name: slyA [C]

Synonym: Bind_2214

Alternate gene names: 182679176

Gene position: 2538425-2538898 (Clockwise)

Preceding gene: 182679174

Following gene: 182679177

Centisome position: 60.87

GC content: 56.33

Gene sequence:

>474_bases
ATGCCTTTCGAACGAGCGGCCTCGGCAGGCTATTTGACTAATTGGGCAGCGCGGCTCTTCGCGCGCGCCATCGACCGACG
CTTGCGCGAGTTCGGCGTCTCGTCCGGTCAGCTCCCGGTTTTTTTCGCGCTCGGCAATGGTGAAGCGCTTTCGCAAAAAG
CCCTGGTCAAGGCGGCCTCGATCGAGCAACCAACCATGGCGGCTACATTGTCACGCATGGAACGTGATGGCCTCGTCGAA
CGCCAGCCAGATCCACAGGATGGCCGGGGCTTTCTGTTCTCTTTGACGCCGCTTGCCATGCAAAAGGCAGAAATGGTCAA
GCAAGCGGTTCTAGCCGTCAATTCCGAAGCATTGGCTGATATTCCCGAGCATGAACGCAAGCCATTTCTAGCTACGCTGA
AGACGATCATCGGATCGCTGGAAGAAATCGATAGCCAAAGCGACTTGAGCCGAACGAAATCGAACAAGGATTAG

Upstream 100 bases:

>100_bases
CGGCCCGACAGCCGTTTCCAATCAATCCTTTCTGTCATTGCCAGATTCGTTCTGGCATATTTATATAGCAGACGATCTAT
TAACATAGCAAGCGATATAA

Downstream 100 bases:

>100_bases
CTGACGAAAGTCGGCTGCGTCCAATCTGTCGTCACCGCCAGGCGGACCATCAAGGGGTTCGAGGCCATGCTATAGCTGCG
CAAGGGCTTCGGCTTCATCG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator; MarR Family Transcriptional Regulatory Protein; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family; MarR Family Transcriptional Regulator Protein

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPFERAASAGYLTNWAARLFARAIDRRLREFGVSSGQLPVFFALGNGEALSQKALVKAASIEQPTMAATLSRMERDGLVE
RQPDPQDGRGFLFSLTPLAMQKAEMVKQAVLAVNSEALADIPEHERKPFLATLKTIIGSLEEIDSQSDLSRTKSNKD

Sequences:

>Translated_157_residues
MPFERAASAGYLTNWAARLFARAIDRRLREFGVSSGQLPVFFALGNGEALSQKALVKAASIEQPTMAATLSRMERDGLVE
RQPDPQDGRGFLFSLTPLAMQKAEMVKQAVLAVNSEALADIPEHERKPFLATLKTIIGSLEEIDSQSDLSRTKSNKD
>Mature_156_residues
PFERAASAGYLTNWAARLFARAIDRRLREFGVSSGQLPVFFALGNGEALSQKALVKAASIEQPTMAATLSRMERDGLVER
QPDPQDGRGFLFSLTPLAMQKAEMVKQAVLAVNSEALADIPEHERKPFLATLKTIIGSLEEIDSQSDLSRTKSNKD

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17222; Mature: 17091

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFERAASAGYLTNWAARLFARAIDRRLREFGVSSGQLPVFFALGNGEALSQKALVKAAS
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHC
IEQPTMAATLSRMERDGLVERQPDPQDGRGFLFSLTPLAMQKAEMVKQAVLAVNSEALAD
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHC
IPEHERKPFLATLKTIIGSLEEIDSQSDLSRTKSNKD
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
>Mature Secondary Structure 
PFERAASAGYLTNWAARLFARAIDRRLREFGVSSGQLPVFFALGNGEALSQKALVKAAS
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHC
IEQPTMAATLSRMERDGLVERQPDPQDGRGFLFSLTPLAMQKAEMVKQAVLAVNSEALAD
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHC
IPEHERKPFLATLKTIIGSLEEIDSQSDLSRTKSNKD
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA