| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679177
Identifier: 182679177
GI number: 182679177
Start: 2539745
End: 2541388
Strand: Direct
Name: 182679177
Synonym: Bind_2216
Alternate gene names: NA
Gene position: 2539745-2541388 (Clockwise)
Preceding gene: 182679176
Following gene: 182679182
Centisome position: 60.9
GC content: 55.6
Gene sequence:
>1644_bases ATGCGTAAGATTATGCAAAATTGGCCCATTCTGCGAGCTAGCGCCGCCGCCGGGATGATAGCTGGGGCTGTTTACGTTCC AATAGGTATCGCTGAGGCTCAAACCGCCAGTCCTGACGCCGTCAAATCTCTCATTACGACTCTGCCCGTAAAGCCGCCGA GCTGGTTTCCTCCTGTATTGTACCAGGCGCTCAGTATTCCGACAGCAACGAGTGTGCCGACCTCGCCGGGAACACTGCCG CCAAAGGTAATTCCGCAAAGTAGTCAGGACCAAAATTTTACGGGCTGGCTCGGCAGCTATCAACCGGGCGGTTCGACACT TACATCGGAAAACGCCTTTTTCCAGTCGCTTGGAAATAACGGGCGCACATGCTTTTCCTGCCATCAGCCAGCCAGCGGCA TGAGCGTCAGCACGGCCGCTCTTCAGCAGATATTCTCCGCCAGCCTTGGGCGCGATCCGGTTTTTGCCGCAGTCGATGGT GCCGACTGCCCGAATCAACCAAGCAATCACAAACTTTTACTGAACAGAGGTCTATTCCGAATCTTCCTGCCGGTTCCCGC CAATGCCGAATACACTCTCACAGTGTCGAGTGATCCGAATGGATGCAACACGCTTTCAGCCTATGCCCAAAGCATCGATC CAACGACCAGCAAGACCGTGCAGATGGTCTCCGTCTACCGCCGCCCGCTCATATCGACCAATCTCAAATTCGTAACCCAG ACGGGTGCCAACCCGAATGGGGCCATCCCCGGCAACACTTTCCTTTGCGCCGATGGAATCACCGGAGCACGACAGCCGAC AGATCCCTTTACGGGTCTTTGCCAAAGCGGCAACATCATGTGGGATGGTCGCGAACCCACGCTGCAAAGTCAGGCCATCA ACGCGACTTTAGGGCATGCGCAAGCAACTCAGGCACCCACAGCCACTCAGCTTGCACAAATCGTTGCCTTTGAAACCGGC TTTTTCAGCGCGCAGGCTTATGATTATTCGGCGGGTAGTCTCAACGCTGACGGCGCGCTCGGCGGCCCGGTGAACCTCTC CCAACAGACGGCGGGCAACTTCCCTGTGCTGACCCCGACTTTCAATATCTACAATGCCTGGAGCGCGGCCAGTGGCATGC AGGCGCTGCAGCGGGCATCGATCTACCGGGGAATGAACCTCTTCAATAATCGACAATTTATCATCAACAATGTCGCGGGC TTCACCAATATTGCGGCCGTGGGTAACAATTTTTCTGGAACTTGTTCCACCTGCCATAGTCAGCGCAATGCCGGAACCGA CACTTTCGTCACGGCTCAGCATGACATTGGGACGGTCGGCGACTCAGTGAGCGACAATGGGCCGGCGCCTTCAACAACGC TGCCGATTTTCAAGCTCACCTGTAAGAATGGCGCATCCACCGTTTACCATGGTTCGGTTGTCCTCACCAATGATCCGGGC AAGGCTCTGATCACTGGCAAATGCGCCGATATCGGCCGGACGTCGGTGCCACCGCTGCGGGCCTTGGCGGCACACGCACC CTATTTCTCCAATGGGTCTGCGGCAACATTGGGCGATGTCGTTTATTTCTATAACAAGCGCTTCAATATTGGCCTGACGA TACAGGAACAAAAGGATCTCGTGAATTTCCTCAACGCGCTCTAA
Upstream 100 bases:
>100_bases TTTTTTCGTTGGAATTTTAAGCGCCTTCCTTATCGCGGAAATCTGACGCATACGAATCAATCTAGCGATTGGCCTCAATT GAATAATGGGGTGGGAAACC
Downstream 100 bases:
>100_bases CATTCTGAAGTCGATAAGTGCGGGGAGTTCTCGGCCGATGAAAACATTATTTTGATCTCTAGCAGGATCTGTTTTGAGCC CGGCTAGATCAGATCCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MRKIMQNWPILRASAAAGMIAGAVYVPIGIAEAQTASPDAVKSLITTLPVKPPSWFPPVLYQALSIPTATSVPTSPGTLP PKVIPQSSQDQNFTGWLGSYQPGGSTLTSENAFFQSLGNNGRTCFSCHQPASGMSVSTAALQQIFSASLGRDPVFAAVDG ADCPNQPSNHKLLLNRGLFRIFLPVPANAEYTLTVSSDPNGCNTLSAYAQSIDPTTSKTVQMVSVYRRPLISTNLKFVTQ TGANPNGAIPGNTFLCADGITGARQPTDPFTGLCQSGNIMWDGREPTLQSQAINATLGHAQATQAPTATQLAQIVAFETG FFSAQAYDYSAGSLNADGALGGPVNLSQQTAGNFPVLTPTFNIYNAWSAASGMQALQRASIYRGMNLFNNRQFIINNVAG FTNIAAVGNNFSGTCSTCHSQRNAGTDTFVTAQHDIGTVGDSVSDNGPAPSTTLPIFKLTCKNGASTVYHGSVVLTNDPG KALITGKCADIGRTSVPPLRALAAHAPYFSNGSAATLGDVVYFYNKRFNIGLTIQEQKDLVNFLNAL
Sequences:
>Translated_547_residues MRKIMQNWPILRASAAAGMIAGAVYVPIGIAEAQTASPDAVKSLITTLPVKPPSWFPPVLYQALSIPTATSVPTSPGTLP PKVIPQSSQDQNFTGWLGSYQPGGSTLTSENAFFQSLGNNGRTCFSCHQPASGMSVSTAALQQIFSASLGRDPVFAAVDG ADCPNQPSNHKLLLNRGLFRIFLPVPANAEYTLTVSSDPNGCNTLSAYAQSIDPTTSKTVQMVSVYRRPLISTNLKFVTQ TGANPNGAIPGNTFLCADGITGARQPTDPFTGLCQSGNIMWDGREPTLQSQAINATLGHAQATQAPTATQLAQIVAFETG FFSAQAYDYSAGSLNADGALGGPVNLSQQTAGNFPVLTPTFNIYNAWSAASGMQALQRASIYRGMNLFNNRQFIINNVAG FTNIAAVGNNFSGTCSTCHSQRNAGTDTFVTAQHDIGTVGDSVSDNGPAPSTTLPIFKLTCKNGASTVYHGSVVLTNDPG KALITGKCADIGRTSVPPLRALAAHAPYFSNGSAATLGDVVYFYNKRFNIGLTIQEQKDLVNFLNAL >Mature_547_residues MRKIMQNWPILRASAAAGMIAGAVYVPIGIAEAQTASPDAVKSLITTLPVKPPSWFPPVLYQALSIPTATSVPTSPGTLP PKVIPQSSQDQNFTGWLGSYQPGGSTLTSENAFFQSLGNNGRTCFSCHQPASGMSVSTAALQQIFSASLGRDPVFAAVDG ADCPNQPSNHKLLLNRGLFRIFLPVPANAEYTLTVSSDPNGCNTLSAYAQSIDPTTSKTVQMVSVYRRPLISTNLKFVTQ TGANPNGAIPGNTFLCADGITGARQPTDPFTGLCQSGNIMWDGREPTLQSQAINATLGHAQATQAPTATQLAQIVAFETG FFSAQAYDYSAGSLNADGALGGPVNLSQQTAGNFPVLTPTFNIYNAWSAASGMQALQRASIYRGMNLFNNRQFIINNVAG FTNIAAVGNNFSGTCSTCHSQRNAGTDTFVTAQHDIGTVGDSVSDNGPAPSTTLPIFKLTCKNGASTVYHGSVVLTNDPG KALITGKCADIGRTSVPPLRALAAHAPYFSNGSAATLGDVVYFYNKRFNIGLTIQEQKDLVNFLNAL
Specific function: Unknown
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57511; Mature: 57511
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC L=rr
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIMQNWPILRASAAAGMIAGAVYVPIGIAEAQTASPDAVKSLITTLPVKPPSWFPPVL CCCCHHHCCEEEEHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHH YQALSIPTATSVPTSPGTLPPKVIPQSSQDQNFTGWLGSYQPGGSTLTSENAFFQSLGNN HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC GRTCFSCHQPASGMSVSTAALQQIFSASLGRDPVFAAVDGADCPNQPSNHKLLLNRGLFR CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCEEE IFLPVPANAEYTLTVSSDPNGCNTLSAYAQSIDPTTSKTVQMVSVYRRPLISTNLKFVTQ EEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCEEEEE TGANPNGAIPGNTFLCADGITGARQPTDPFTGLCQSGNIMWDGREPTLQSQAINATLGHA CCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCC QATQAPTATQLAQIVAFETGFFSAQAYDYSAGSLNADGALGGPVNLSQQTAGNFPVLTPT CCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCEECCC FNIYNAWSAASGMQALQRASIYRGMNLFNNRQFIINNVAGFTNIAAVGNNFSGTCSTCHS CCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHH QRNAGTDTFVTAQHDIGTVGDSVSDNGPAPSTTLPIFKLTCKNGASTVYHGSVVLTNDPG HCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECEEEEECCCC KALITGKCADIGRTSVPPLRALAAHAPYFSNGSAATLGDVVYFYNKRFNIGLTIQEQKDL CEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHEEEEECCEEEEEEEEHHHHHH VNFLNAL HHHHHCC >Mature Secondary Structure MRKIMQNWPILRASAAAGMIAGAVYVPIGIAEAQTASPDAVKSLITTLPVKPPSWFPPVL CCCCHHHCCEEEEHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHH YQALSIPTATSVPTSPGTLPPKVIPQSSQDQNFTGWLGSYQPGGSTLTSENAFFQSLGNN HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC GRTCFSCHQPASGMSVSTAALQQIFSASLGRDPVFAAVDGADCPNQPSNHKLLLNRGLFR CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCEEE IFLPVPANAEYTLTVSSDPNGCNTLSAYAQSIDPTTSKTVQMVSVYRRPLISTNLKFVTQ EEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCEEEEE TGANPNGAIPGNTFLCADGITGARQPTDPFTGLCQSGNIMWDGREPTLQSQAINATLGHA CCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCC QATQAPTATQLAQIVAFETGFFSAQAYDYSAGSLNADGALGGPVNLSQQTAGNFPVLTPT CCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCEECCC FNIYNAWSAASGMQALQRASIYRGMNLFNNRQFIINNVAGFTNIAAVGNNFSGTCSTCHS CCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHH QRNAGTDTFVTAQHDIGTVGDSVSDNGPAPSTTLPIFKLTCKNGASTVYHGSVVLTNDPG HCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECEEEEECCCC KALITGKCADIGRTSVPPLRALAAHAPYFSNGSAATLGDVVYFYNKRFNIGLTIQEQKDL CEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHEEEEECCEEEEEEEEHHHHHH VNFLNAL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA