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The map label for this gene is ygbL [C]

Identifier: 182679046

GI number: 182679046

Start: 2380854

End: 2381516

Strand: Reverse

Name: ygbL [C]

Synonym: Bind_2082

Alternate gene names: 182679046

Gene position: 2381516-2380854 (Counterclockwise)

Preceding gene: 182679047

Following gene: 182679035

Centisome position: 57.11

GC content: 56.71

Gene sequence:

>663_bases
ATGAGCGAGACAAAATTGCGCGACGAAATCTGCCGTTTTGGTCGTTCGCTCTTTGAACGTGGCCTGACGCCTGGGTCTTC
CGGCAATATCAGTCTTCGGCTTGATGATGGAGGCTGGCTTGTCACGCCAACCAATGCCTCGCTCGGTTTTCTCGATCCGG
CGCGCATCACGCGGCTCGATGCCACTGGAAAACTGGTTTCTGGTGATGCACCGACCAAGGAGATCCCGCTCCATGCGGCG
CTTTATGAAACGCGAAGCAGCGCCCGCGCCATTGTGCATCTGCATTCGACGCATTCCGTCGCGCTATCTATGCTGCCGGA
AATTGATCCGCGCGCGGTCTTGCCGCCGATAACGCCTTATTATCTCATGCGGGCGGGCGTGACCGCGCTTGTGCCCTATT
ATCGTCCCGGTGATCCTGCCGTGGCCGATGCCATCAAGGGGCTTGCCGGCCGTTATACGTCCGTCTTGTTGGCCAATCAC
GGTCCCGTTGTTGCTGGTGATACGCTCGAAGCAGCCGTCTTCGCCACTGAGGAATTGGAAGAGACCGCGAAGCTTTATCT
TTTGCTGCGTGGTCTCAACCCGCGCTATTTGACGAAAGAACAGGTCGAGGATCTCGTCAAAACTTTTGGCCTGAAATTGG
CCGAGGAACCGCATTCACATTGA

Upstream 100 bases:

>100_bases
CTGCTCGGATGGACCGTCGCAGCTTATTGATGTCGGATTTGAATTGATGCAAGGCGCGACGGCCTGAGTGAGGCTGGCAT
ACGAAGAGGCGGAAAACACG

Downstream 100 bases:

>100_bases
ATGCGGTTCATTTATTACGTCTTGCCGCATTCACATTGAATGCGGTCCAGGGACTGTGGCTCTAATCGTCACGCTTTGCC
GGTCAGTTTGGCAGGAACCA

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSETKLRDEICRFGRSLFERGLTPGSSGNISLRLDDGGWLVTPTNASLGFLDPARITRLDATGKLVSGDAPTKEIPLHAA
LYETRSSARAIVHLHSTHSVALSMLPEIDPRAVLPPITPYYLMRAGVTALVPYYRPGDPAVADAIKGLAGRYTSVLLANH
GPVVAGDTLEAAVFATEELEETAKLYLLLRGLNPRYLTKEQVEDLVKTFGLKLAEEPHSH

Sequences:

>Translated_220_residues
MSETKLRDEICRFGRSLFERGLTPGSSGNISLRLDDGGWLVTPTNASLGFLDPARITRLDATGKLVSGDAPTKEIPLHAA
LYETRSSARAIVHLHSTHSVALSMLPEIDPRAVLPPITPYYLMRAGVTALVPYYRPGDPAVADAIKGLAGRYTSVLLANH
GPVVAGDTLEAAVFATEELEETAKLYLLLRGLNPRYLTKEQVEDLVKTFGLKLAEEPHSH
>Mature_219_residues
SETKLRDEICRFGRSLFERGLTPGSSGNISLRLDDGGWLVTPTNASLGFLDPARITRLDATGKLVSGDAPTKEIPLHAAL
YETRSSARAIVHLHSTHSVALSMLPEIDPRAVLPPITPYYLMRAGVTALVPYYRPGDPAVADAIKGLAGRYTSVLLANHG
PVVAGDTLEAAVFATEELEETAKLYLLLRGLNPRYLTKEQVEDLVKTFGLKLAEEPHSH

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=203, Percent_Identity=49.2610837438424, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1789164, Length=222, Percent_Identity=30.1801801801802, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 23869; Mature: 23737

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETKLRDEICRFGRSLFERGLTPGSSGNISLRLDDGGWLVTPTNASLGFLDPARITRLD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHEEEEC
ATGKLVSGDAPTKEIPLHAALYETRSSARAIVHLHSTHSVALSMLPEIDPRAVLPPITPY
CCCCEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCHH
YLMRAGVTALVPYYRPGDPAVADAIKGLAGRYTSVLLANHGPVVAGDTLEAAVFATEELE
HHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHHHHHHHHHH
ETAKLYLLLRGLNPRYLTKEQVEDLVKTFGLKLAEEPHSH
HHHHHHHHEECCCCCCCCHHHHHHHHHHHCCEECCCCCCC
>Mature Secondary Structure 
SETKLRDEICRFGRSLFERGLTPGSSGNISLRLDDGGWLVTPTNASLGFLDPARITRLD
CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHEEEEC
ATGKLVSGDAPTKEIPLHAALYETRSSARAIVHLHSTHSVALSMLPEIDPRAVLPPITPY
CCCCEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCHH
YLMRAGVTALVPYYRPGDPAVADAIKGLAGRYTSVLLANHGPVVAGDTLEAAVFATEELE
HHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCEEECCCHHHHHHHHHHHH
ETAKLYLLLRGLNPRYLTKEQVEDLVKTFGLKLAEEPHSH
HHHHHHHHEECCCCCCCCHHHHHHHHHHHCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]