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The map label for this gene is accD

Identifier: 182678953

GI number: 182678953

Start: 2271177

End: 2272046

Strand: Reverse

Name: accD

Synonym: Bind_1987

Alternate gene names: 182678953

Gene position: 2272046-2271177 (Counterclockwise)

Preceding gene: 182678954

Following gene: 182678952

Centisome position: 54.48

GC content: 58.97

Gene sequence:

>870_bases
ATGAATTGGATTTCCAATGTCGTTCCGCCGAAAATCAGGTCCTTCCTGCGGCGCGATACGCCGGAAAATCTCTGGATCAA
ATGCCCGGAAAGCGGCGAACTGGTTTTCCATAAGGATCTGGAAGCCAATCTTTTCGTCATTCCGGGGTCGGGTTATCATA
TGTATATCGCGCCCAAGCCGCGGCTCGATGCTCTATTCGACGAAGGAGTCTATGAGACGATCCCGACGCCGGAGGTCCCG
CTCGATCCGCTGAAATTCCGCGATGTCAAACGCTATACCGACCGTATCAAGGAATATCGTCAGAAGACCGGCGCGCCGGA
TGCGGTCAAATTGGCTTATGGCAAGTTACAAGGCCTCGATGCGGTCGTGGCGGTGCAGGATTTCGCCTTTCTCGGCGGTT
CTCTCGGCATGGCGGCCGGGGAGGCTGTCATCACTGGCATGCAGCAGGCGCTTGAACGGCAAGCGCCTTTCATCATCTTC
ACAGCCTCCGGCGGCGCACGCATGCAGGAAGGCATGTTCTCCCTGATGCAGATGCCGCGTACGACGCTGATGGTGCAGGC
CCTGCGGGAGGCCAGGTTGCCCTATATTGTCGTTCTGACACATCCGACGACCGGAGGGGTCAGCGCCTCCTATGCCATGC
TCGGCGACATTCAGGTCGCCGAACCCGGCGCCGTCATCGGTTTTGCCGGGGCGCGGGTCATCGAACAGACCATCCACGAA
CATTTGCCGGAAGGTTTTCAGCGCGCGGAATATCTACAGGCGCATGGCATGGTTGATATGGTGGTGCGCCGGCATGATCT
GCCTGCCGTGCTCGCCCGTCTTTGCGCCTTTTTAACCAACAGCCCGCGTCGCGCTCCGATCCCCGCCTGA

Upstream 100 bases:

>100_bases
CGCCGAAGGTGTGCGGAGCGCAGCAGCAGCAGCCTGACTGCGCGCACAAAATTGAGTCGCTCCGAGAGCGTAACCCGAGA
CAATCGCCGAGAGAACCGCA

Downstream 100 bases:

>100_bases
CCCCATCGCATGCAGGCTCTCGACACGCTTCTTGCCCGGCTGTTCACCTTGCATCCGCAGCAGATCGAGCTTTCGCTCGG
CCGTATGCGGCGGCTCTTGG

Product: acetyl-CoA carboxylase, carboxyl transferase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNWISNVVPPKIRSFLRRDTPENLWIKCPESGELVFHKDLEANLFVIPGSGYHMYIAPKPRLDALFDEGVYETIPTPEVP
LDPLKFRDVKRYTDRIKEYRQKTGAPDAVKLAYGKLQGLDAVVAVQDFAFLGGSLGMAAGEAVITGMQQALERQAPFIIF
TASGGARMQEGMFSLMQMPRTTLMVQALREARLPYIVVLTHPTTGGVSASYAMLGDIQVAEPGAVIGFAGARVIEQTIHE
HLPEGFQRAEYLQAHGMVDMVVRRHDLPAVLARLCAFLTNSPRRAPIPA

Sequences:

>Translated_289_residues
MNWISNVVPPKIRSFLRRDTPENLWIKCPESGELVFHKDLEANLFVIPGSGYHMYIAPKPRLDALFDEGVYETIPTPEVP
LDPLKFRDVKRYTDRIKEYRQKTGAPDAVKLAYGKLQGLDAVVAVQDFAFLGGSLGMAAGEAVITGMQQALERQAPFIIF
TASGGARMQEGMFSLMQMPRTTLMVQALREARLPYIVVLTHPTTGGVSASYAMLGDIQVAEPGAVIGFAGARVIEQTIHE
HLPEGFQRAEYLQAHGMVDMVVRRHDLPAVLARLCAFLTNSPRRAPIPA
>Mature_289_residues
MNWISNVVPPKIRSFLRRDTPENLWIKCPESGELVFHKDLEANLFVIPGSGYHMYIAPKPRLDALFDEGVYETIPTPEVP
LDPLKFRDVKRYTDRIKEYRQKTGAPDAVKLAYGKLQGLDAVVAVQDFAFLGGSLGMAAGEAVITGMQQALERQAPFIIF
TASGGARMQEGMFSLMQMPRTTLMVQALREARLPYIVVLTHPTTGGVSASYAMLGDIQVAEPGAVIGFAGARVIEQTIHE
HLPEGFQRAEYLQAHGMVDMVVRRHDLPAVLARLCAFLTNSPRRAPIPA

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family

Homologues:

Organism=Escherichia coli, GI1788655, Length=292, Percent_Identity=46.9178082191781, Blast_Score=264, Evalue=4e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACCD_BEII9 (B2IF45)

Other databases:

- EMBL:   CP001016
- RefSeq:   YP_001833099.1
- GeneID:   6200743
- GenomeReviews:   CP001016_GR
- KEGG:   bid:Bind_1987
- HOGENOM:   HBG285696
- OMA:   LEHGMVD
- ProtClustDB:   CLSK2405619
- HAMAP:   MF_01395
- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762
- PRINTS:   PR01070
- TIGRFAMs:   TIGR00515

Pfam domain/function: PF01039 Carboxyl_trans

EC number: =6.4.1.2

Molecular weight: Translated: 31931; Mature: 31931

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWISNVVPPKIRSFLRRDTPENLWIKCPESGELVFHKDLEANLFVIPGSGYHMYIAPKP
CCCHHHCCCHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCEEEEECCCEEEEECCCC
RLDALFDEGVYETIPTPEVPLDPLKFRDVKRYTDRIKEYRQKTGAPDAVKLAYGKLQGLD
CHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCH
AVVAVQDFAFLGGSLGMAAGEAVITGMQQALERQAPFIIFTASGGARMQEGMFSLMQMPR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCH
TTLMVQALREARLPYIVVLTHPTTGGVSASYAMLGDIQVAEPGAVIGFAGARVIEQTIHE
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHEECCEEECCCCCEEEHHHHHHHHHHHHH
HLPEGFQRAEYLQAHGMVDMVVRRHDLPAVLARLCAFLTNSPRRAPIPA
HHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNWISNVVPPKIRSFLRRDTPENLWIKCPESGELVFHKDLEANLFVIPGSGYHMYIAPKP
CCCHHHCCCHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCEEEEECCCEEEEECCCC
RLDALFDEGVYETIPTPEVPLDPLKFRDVKRYTDRIKEYRQKTGAPDAVKLAYGKLQGLD
CHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCH
AVVAVQDFAFLGGSLGMAAGEAVITGMQQALERQAPFIIFTASGGARMQEGMFSLMQMPR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCH
TTLMVQALREARLPYIVVLTHPTTGGVSASYAMLGDIQVAEPGAVIGFAGARVIEQTIHE
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHEECCEEECCCCCEEEHHHHHHHHHHHHH
HLPEGFQRAEYLQAHGMVDMVVRRHDLPAVLARLCAFLTNSPRRAPIPA
HHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA