| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677994
Identifier: 182677994
GI number: 182677994
Start: 1156778
End: 1157503
Strand: Direct
Name: 182677994
Synonym: Bind_1008
Alternate gene names: NA
Gene position: 1156778-1157503 (Clockwise)
Preceding gene: 182677993
Following gene: 182677995
Centisome position: 27.74
GC content: 61.43
Gene sequence:
>726_bases ATGAATTCCGCCAAAGCCTCCGCTTGCCGCAGAACGGTTTCGCCGGCCAGGGGTTTCATTACCGCTTCTGCTTTATGCCT TGGCCTCGTGCTCGGTCTCGGTGCGGTCGCGCCTGCCGCCGCCTATGAAGATACGAACCCGCTGAATTCCTTGCTCGGCT TTGTCGGCATGCAATTCGACAAGGAAGAGCAGGAGGCAATCGACTATCGGGCACGGGCGCCGCTCGTCGTACCGCCGCAT ATGGATCAATTGCCAGCACCTGTGGCGCGCAAGGAACAAGATGCCGCTTGGCCTAAGGATCCTGACGTTTTGGCGCGCAA ACGGGCCGCGGCGGATTCCCATCGTCCAGCGCCGCAGGTCAATCTGAATACGCGCGCCGAGCTTTCGCCGCAGGAACTGG CGCGCGGCAAGACCGATAAGACGGAGGAGCCGGGCGGCAAACCCGATGATGGGTGCCAGGCGACGGCGGGCACGGCGATG TGCGTCTATGCGCCGTGGAATCTCTTGAAAAAAGTTATGCACAAGGATGACGAGGAAGTCGTCAATGTGGGTGACGAGCC TTCGCGGAAATATCTGACCGAGCCACCGGCTGGCTATCGTGCCGCGACCAAGACGACCCATTTCGAATCCGACAAGAACG CCAAGGCAACGGTGGATGCGGGCGATGCCGCCGCCTATACGCGCAGCCAGGGCCACAAAAGCGCGGCCGACGCCTTTGAC CGGTAA
Upstream 100 bases:
>100_bases CGCGGATGTCAGGTTTAAAAAGGCAGGTCTATCTTCTGTTTGCCTTGATTTGGCCCGGTTCCGCCCTTTCTTATCGAGTG CCCAGCGAGAAGGAGAGATC
Downstream 100 bases:
>100_bases GCGCGGCGAGGGCTCCAGCGTGCCGCAAGCCTGACGCCCGAAAAGACTTGGCGTGAATTCTGCTTGTTTCAAAGGTCCAA ATGTTCTGATTTTTTCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MNSAKASACRRTVSPARGFITASALCLGLVLGLGAVAPAAAYEDTNPLNSLLGFVGMQFDKEEQEAIDYRARAPLVVPPH MDQLPAPVARKEQDAAWPKDPDVLARKRAAADSHRPAPQVNLNTRAELSPQELARGKTDKTEEPGGKPDDGCQATAGTAM CVYAPWNLLKKVMHKDDEEVVNVGDEPSRKYLTEPPAGYRAATKTTHFESDKNAKATVDAGDAAAYTRSQGHKSAADAFD R
Sequences:
>Translated_241_residues MNSAKASACRRTVSPARGFITASALCLGLVLGLGAVAPAAAYEDTNPLNSLLGFVGMQFDKEEQEAIDYRARAPLVVPPH MDQLPAPVARKEQDAAWPKDPDVLARKRAAADSHRPAPQVNLNTRAELSPQELARGKTDKTEEPGGKPDDGCQATAGTAM CVYAPWNLLKKVMHKDDEEVVNVGDEPSRKYLTEPPAGYRAATKTTHFESDKNAKATVDAGDAAAYTRSQGHKSAADAFD R >Mature_241_residues MNSAKASACRRTVSPARGFITASALCLGLVLGLGAVAPAAAYEDTNPLNSLLGFVGMQFDKEEQEAIDYRARAPLVVPPH MDQLPAPVARKEQDAAWPKDPDVLARKRAAADSHRPAPQVNLNTRAELSPQELARGKTDKTEEPGGKPDDGCQATAGTAM CVYAPWNLLKKVMHKDDEEVVNVGDEPSRKYLTEPPAGYRAATKTTHFESDKNAKATVDAGDAAAYTRSQGHKSAADAFD R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25811; Mature: 25811
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSAKASACRRTVSPARGFITASALCLGLVLGLGAVAPAAAYEDTNPLNSLLGFVGMQFD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCC KEEQEAIDYRARAPLVVPPHMDQLPAPVARKEQDAAWPKDPDVLARKRAAADSHRPAPQV CHHHHHHHHHHCCCEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC NLNTRAELSPQELARGKTDKTEEPGGKPDDGCQATAGTAMCVYAPWNLLKKVMHKDDEEV CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCHHH VNVGDEPSRKYLTEPPAGYRAATKTTHFESDKNAKATVDAGDAAAYTRSQGHKSAADAFD HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHCC R C >Mature Secondary Structure MNSAKASACRRTVSPARGFITASALCLGLVLGLGAVAPAAAYEDTNPLNSLLGFVGMQFD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCC KEEQEAIDYRARAPLVVPPHMDQLPAPVARKEQDAAWPKDPDVLARKRAAADSHRPAPQV CHHHHHHHHHHCCCEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC NLNTRAELSPQELARGKTDKTEEPGGKPDDGCQATAGTAMCVYAPWNLLKKVMHKDDEEV CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCHHH VNVGDEPSRKYLTEPPAGYRAATKTTHFESDKNAKATVDAGDAAAYTRSQGHKSAADAFD HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA