| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is pqqL [C]
Identifier: 182677995
GI number: 182677995
Start: 1157789
End: 1159195
Strand: Direct
Name: pqqL [C]
Synonym: Bind_1009
Alternate gene names: 182677995
Gene position: 1157789-1159195 (Clockwise)
Preceding gene: 182677994
Following gene: 182677996
Centisome position: 27.76
GC content: 59.63
Gene sequence:
>1407_bases ATGAAAGCGATGGTCTGCATGTCTCAGGGTCAGTCGAGCGCGGCATCACCTGTTCAAGGTTCTTTCGGCCTCACCCCTTC GCCAGCCAATCCGGCCAAGGCCCATGGGCCGCAAGTCAGTCAGGCGAAGCTCGCCAATGGCATGGACATTGTGGTCATTC CTGACCATCGCGCGCCTGTCATCACCCATATGGTCTGGTATCGTAACGGGTCCGCCGATGATCCAGTGGGCAAGTCCGGC ATTGCGCATTTCCTTGAACATCTCATGTTCAAGGGCACCAAGGATCACAAACAGGGCGAATTTTCCGAAGTGATCGCCGA TTTCGGCGGTCAGGAAAACGCCTTCACCTCGAATGATTATACCGCCTATTTCCAGCGGGTCGCCAAGGACCATCTCCGCG TCTGCATGAATTACGAGGCTGACCGGATGAAAAATCTGGTCCTCTCCGATGAAGTGGTCGCCCCCGAGCGCGATGTCGTG CTCGAGGAGCGCCGCATGCGCACGGATTCCGATCCCTCGGACCTTCTGAACGAGGCAGTCCAGGCCGCCCTTTATACGCA TCATCCCTATGGCAAGCCGATCATCGGTTGGAGCCATGAGATCGAAACCCTCGATCGCCAGGATGCGTTTGCCTATTACG ATCGTTTCTATACGCCAGAAAATGCGATTCTCGTCGTCGCCGGCGATGTCGAGCCCGATGAGGTTCTGGCGCTTGCCGAG GATGTCTATGGCAAGATCCCGGCCCATGGCGAGGCGCCGCGTCGCTCGCGTCCCCGTGAGCCCGAGCCGCGCGCTCATCG GCTCGTCAAGCTCGTCGATGAAAAGGTCGAACAGCCGACGCATCAGGGGGTCTTCCTCGTCCCGTCCTACAAGACGGCCG CGCCTGGCGAAGCGGAAGCGCTTGAAGTTCTCGGCCATTTGCTGGGCGGCGGTCAGACCAGCCTGTTGTTCAAAAAGCTC GTCGTGGCCGATAAAGTCGCCGTTGCCGCCGGCGCCCATTACCAGGGGACGGCTGTCGATCAGACGCGCTTCTATGTTTA TGGCATCCCGGCGCCAGGCATTACGCTCGAGGAAATCGACAATGCCATTGACGCCGTCATTGCCCATGTGGCCAAGGAAG GCGTCTCGGAAGCGGATCTGCGTCGCACCAAGACCCGACTCGTCGCAGAGGCGATCTATGCCCAGGATAATCAATCGACA TTGGCGCGGTGGTATGGCGCTTCGCTCAGCGTTGGCCTGACCCTGAACGATATTGCCGAATGGCCGGCGCGAATCGAGGC CGTTACCCTGGAGGATGTCAAGAAAGCCACGCGCTGGCTCGCCAAAAGGCGCGGCGTTACGGGTTTCCTCCTGCCGGCCC ATGCCCCAGGAGAACATACGATCGAGGTCGAGACCGAGGCCAGTTGA
Upstream 100 bases:
>100_bases AAGGTTGCAATGAATGGTCCCGCGAAGGATGCGCGGGAAGATGCATAACAGGCAGGTAACAGCCTCGTGCCACAAGCGTG GCGTAGGCGCCTGCGAGTGA
Downstream 100 bases:
>100_bases ACCGGCCTTCTGGTTGCGCCCGCTTCCTGTTGATGCCAGGGTCAGATGATCCGTGCTGATCGGGTGCATAATTCGTAGCT CCTCATGGCAGGTCGCCATC
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MKAMVCMSQGQSSAASPVQGSFGLTPSPANPAKAHGPQVSQAKLANGMDIVVIPDHRAPVITHMVWYRNGSADDPVGKSG IAHFLEHLMFKGTKDHKQGEFSEVIADFGGQENAFTSNDYTAYFQRVAKDHLRVCMNYEADRMKNLVLSDEVVAPERDVV LEERRMRTDSDPSDLLNEAVQAALYTHHPYGKPIIGWSHEIETLDRQDAFAYYDRFYTPENAILVVAGDVEPDEVLALAE DVYGKIPAHGEAPRRSRPREPEPRAHRLVKLVDEKVEQPTHQGVFLVPSYKTAAPGEAEALEVLGHLLGGGQTSLLFKKL VVADKVAVAAGAHYQGTAVDQTRFYVYGIPAPGITLEEIDNAIDAVIAHVAKEGVSEADLRRTKTRLVAEAIYAQDNQST LARWYGASLSVGLTLNDIAEWPARIEAVTLEDVKKATRWLAKRRGVTGFLLPAHAPGEHTIEVETEAS
Sequences:
>Translated_468_residues MKAMVCMSQGQSSAASPVQGSFGLTPSPANPAKAHGPQVSQAKLANGMDIVVIPDHRAPVITHMVWYRNGSADDPVGKSG IAHFLEHLMFKGTKDHKQGEFSEVIADFGGQENAFTSNDYTAYFQRVAKDHLRVCMNYEADRMKNLVLSDEVVAPERDVV LEERRMRTDSDPSDLLNEAVQAALYTHHPYGKPIIGWSHEIETLDRQDAFAYYDRFYTPENAILVVAGDVEPDEVLALAE DVYGKIPAHGEAPRRSRPREPEPRAHRLVKLVDEKVEQPTHQGVFLVPSYKTAAPGEAEALEVLGHLLGGGQTSLLFKKL VVADKVAVAAGAHYQGTAVDQTRFYVYGIPAPGITLEEIDNAIDAVIAHVAKEGVSEADLRRTKTRLVAEAIYAQDNQST LARWYGASLSVGLTLNDIAEWPARIEAVTLEDVKKATRWLAKRRGVTGFLLPAHAPGEHTIEVETEAS >Mature_468_residues MKAMVCMSQGQSSAASPVQGSFGLTPSPANPAKAHGPQVSQAKLANGMDIVVIPDHRAPVITHMVWYRNGSADDPVGKSG IAHFLEHLMFKGTKDHKQGEFSEVIADFGGQENAFTSNDYTAYFQRVAKDHLRVCMNYEADRMKNLVLSDEVVAPERDVV LEERRMRTDSDPSDLLNEAVQAALYTHHPYGKPIIGWSHEIETLDRQDAFAYYDRFYTPENAILVVAGDVEPDEVLALAE DVYGKIPAHGEAPRRSRPREPEPRAHRLVKLVDEKVEQPTHQGVFLVPSYKTAAPGEAEALEVLGHLLGGGQTSLLFKKL VVADKVAVAAGAHYQGTAVDQTRFYVYGIPAPGITLEEIDNAIDAVIAHVAKEGVSEADLRRTKTRLVAEAIYAQDNQST LARWYGASLSVGLTLNDIAEWPARIEAVTLEDVKKATRWLAKRRGVTGFLLPAHAPGEHTIEVETEAS
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI46593007, Length=211, Percent_Identity=28.9099526066351, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI94538354, Length=219, Percent_Identity=29.2237442922374, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI155969707, Length=326, Percent_Identity=24.8466257668712, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI1787770, Length=243, Percent_Identity=27.9835390946502, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI2367164, Length=218, Percent_Identity=25.2293577981651, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71999683, Length=417, Percent_Identity=23.5011990407674, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17553678, Length=248, Percent_Identity=28.2258064516129, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323192, Length=386, Percent_Identity=23.8341968911917, Blast_Score=103, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6323421, Length=306, Percent_Identity=24.5098039215686, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21357875, Length=212, Percent_Identity=28.3018867924528, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI24646943, Length=212, Percent_Identity=28.3018867924528, Blast_Score=96, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 51286; Mature: 51286
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAMVCMSQGQSSAASPVQGSFGLTPSPANPAKAHGPQVSQAKLANGMDIVVIPDHRAPV CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCH ITHMVWYRNGSADDPVGKSGIAHFLEHLMFKGTKDHKQGEFSEVIADFGGQENAFTSNDY HHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHH TAYFQRVAKDHLRVCMNYEADRMKNLVLSDEVVAPERDVVLEERRMRTDSDPSDLLNEAV HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH QAALYTHHPYGKPIIGWSHEIETLDRQDAFAYYDRFYTPENAILVVAGDVEPDEVLALAE HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH DVYGKIPAHGEAPRRSRPREPEPRAHRLVKLVDEKVEQPTHQGVFLVPSYKTAAPGEAEA HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHH LEVLGHLLGGGQTSLLFKKLVVADKVAVAAGAHYQGTAVDQTRFYVYGIPAPGITLEEID HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEEECCCCCCCHHHHH NAIDAVIAHVAKEGVSEADLRRTKTRLVAEAIYAQDNQSTLARWYGASLSVGLTLNDIAE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEHHHHHH WPARIEAVTLEDVKKATRWLAKRRGVTGFLLPAHAPGEHTIEVETEAS CCHHEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCC >Mature Secondary Structure MKAMVCMSQGQSSAASPVQGSFGLTPSPANPAKAHGPQVSQAKLANGMDIVVIPDHRAPV CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCH ITHMVWYRNGSADDPVGKSGIAHFLEHLMFKGTKDHKQGEFSEVIADFGGQENAFTSNDY HHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHH TAYFQRVAKDHLRVCMNYEADRMKNLVLSDEVVAPERDVVLEERRMRTDSDPSDLLNEAV HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH QAALYTHHPYGKPIIGWSHEIETLDRQDAFAYYDRFYTPENAILVVAGDVEPDEVLALAE HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH DVYGKIPAHGEAPRRSRPREPEPRAHRLVKLVDEKVEQPTHQGVFLVPSYKTAAPGEAEA HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHH LEVLGHLLGGGQTSLLFKKLVVADKVAVAAGAHYQGTAVDQTRFYVYGIPAPGITLEEID HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEEECCCCCCCHHHHH NAIDAVIAHVAKEGVSEADLRRTKTRLVAEAIYAQDNQSTLARWYGASLSVGLTLNDIAE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEHHHHHH WPARIEAVTLEDVKKATRWLAKRRGVTGFLLPAHAPGEHTIEVETEAS CCHHEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]