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The map label for this gene is ugpB

Identifier: 197294188

GI number: 197294188

Start: 26694

End: 28268

Strand: Reverse

Name: ugpB

Synonym: PAa_0022

Alternate gene names: NA

Gene position: 28268-26694 (Counterclockwise)

Preceding gene: 197294189

Following gene: 197294187

Centisome position: 3.21

GC content: 25.4

Gene sequence:

>1575_bases
GTGGTATCAAAGGATAAATTAAAAATTATTGCTTTTTTCCTTTTTTCTTTCTTGGTTTTAACCATTATTATTTTATTTCC
CAAAACTTCAGCTAAAGAATTAAGAAAAAAAAATTATACAACTTTAAAAGCAAAACTTGAAGAATATAAAGATGGAAATA
ATTGGAAAAAATTTAAGGATAAAAAAATTGAAATTATTTTTTGGCATAATTTAGGAAAAGAAGGCAACAACCAAGAAATT
TTGCAACAAATCATCAGTAAATTTCAAGAGAAATATCAAAATATTACAGTTAAAGAAGAATTTAAAGGCAATTGGGGAAC
TCTTACTAAAAACATTAACGTTGCTTTGCCAGCCAACAACGAACCCCATTTGATTGTTTCTTACCCTGATTTTTTAGTTA
ATTATTATGAATCAGGAAAACTCGTGCCTTTAAATGATTTTATTTTCCACAAAAATGAAGAAATAAAATTAGAAAAAGAA
GAAAAAGAAAATACATTTTTTTATCCTATTTATGAAGAGGAATCACAAATTGCATTAGGGGAAGAAGAAAAAAAATGGTA
TTCTTTACCTTTCACCAAAAACGTTGAATTAATGTTTTATAACCAAACCTATTTGAAAAACTTATTAAAAAGAATCTCTA
AGGAAGACTTTGGTAAAATAAAAAAATGTTTTAAAGACAAACAACCAGAAACTGGCGAATTAAAAGATGGTATTACTTGG
GAAGAATTAAAAACATTATCTGAAATAATTAAAAAACACAATCCTCAAAAAATTCCTATTTCTTATGAATCTGAATCTAA
TTTATTTATTGTTTCTTCTGAACAAAAAAATATTGAATATACAAATCCCAAAACTACAAACGATCAACTAGGAGTTGGTT
TTAACAATCAAGATGCTCAAAAGATGATTAGAGATTTAAAAGAACAATTTTATGATGAAAAAAAATATTTAATTACTCGC
AAATTATCAGGCGAAAACCATACTCTTAATTTGTTTGCTAAACAAGACATATTAATGAATATTAATTCTTCTAATGGATT
GGATTATGTAAATAAAGTTGGTTTTGAAGTCGGGGTAACTTCTTGTCCTTATTGGGAAAAAGGGAAAAGGAAAACTTTAC
AACAAGGAGCAAACATTAATTTATTTTATAAAAAAGATAAAGATGAAGTTATTGCTTCTTGGTTGTTTTTAAAACATTTA
ACTTCACAAAAAGCCAACGAAATCTTATTTTTACAAGAAAGCAGCCAATTTCCTACTAGACCTGGTTATGTTAATTCAAA
AGGATTTCAAGATAAAATAGATGATTATAAAAAATTTTCAGAAAAACAATATGATAAATTATCAACTGAAGAACGTAAAG
AACTTTTAAAAGCTAAACTTTTAGTTTTTTTAAACAACGAAAGAGAACAAGATGAAAAAGATAAAATTTATTTTTTCTCT
CCCGTCTTTCAAAAATCTTATATTGCAAGAATAGTAGTAAATCAATTGCTAGTAGATTGTTTTTTATTAAAAGAAAATGA
TCAAGAAAAAATTGCTCAATTATTTGAAATAGCGCAAAAAAAAGCACTTGCTTAA

Upstream 100 bases:

>100_bases
TTAATTAATCAGCAAATGGCAGCCACTACTTTAATCACAGTCCCTTTGGTTTTGTTATTTATTTTTTGCAAGAAATACGT
TTTAGAAGGAAATTTAAACA

Downstream 100 bases:

>100_bases
ATAAATAAAATCATAGAAGGATAAAATATGCAAATTATTTATGAACAAATTAAAAAATTTGATAAAATTATTATCCATGG
ACATATTAATCCTGATGGTG

Product: Sugar transport system substrate-binding protein, periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MVSKDKLKIIAFFLFSFLVLTIIILFPKTSAKELRKKNYTTLKAKLEEYKDGNNWKKFKDKKIEIIFWHNLGKEGNNQEI
LQQIISKFQEKYQNITVKEEFKGNWGTLTKNINVALPANNEPHLIVSYPDFLVNYYESGKLVPLNDFIFHKNEEIKLEKE
EKENTFFYPIYEEESQIALGEEEKKWYSLPFTKNVELMFYNQTYLKNLLKRISKEDFGKIKKCFKDKQPETGELKDGITW
EELKTLSEIIKKHNPQKIPISYESESNLFIVSSEQKNIEYTNPKTTNDQLGVGFNNQDAQKMIRDLKEQFYDEKKYLITR
KLSGENHTLNLFAKQDILMNINSSNGLDYVNKVGFEVGVTSCPYWEKGKRKTLQQGANINLFYKKDKDEVIASWLFLKHL
TSQKANEILFLQESSQFPTRPGYVNSKGFQDKIDDYKKFSEKQYDKLSTEERKELLKAKLLVFLNNEREQDEKDKIYFFS
PVFQKSYIARIVVNQLLVDCFLLKENDQEKIAQLFEIAQKKALA

Sequences:

>Translated_524_residues
MVSKDKLKIIAFFLFSFLVLTIIILFPKTSAKELRKKNYTTLKAKLEEYKDGNNWKKFKDKKIEIIFWHNLGKEGNNQEI
LQQIISKFQEKYQNITVKEEFKGNWGTLTKNINVALPANNEPHLIVSYPDFLVNYYESGKLVPLNDFIFHKNEEIKLEKE
EKENTFFYPIYEEESQIALGEEEKKWYSLPFTKNVELMFYNQTYLKNLLKRISKEDFGKIKKCFKDKQPETGELKDGITW
EELKTLSEIIKKHNPQKIPISYESESNLFIVSSEQKNIEYTNPKTTNDQLGVGFNNQDAQKMIRDLKEQFYDEKKYLITR
KLSGENHTLNLFAKQDILMNINSSNGLDYVNKVGFEVGVTSCPYWEKGKRKTLQQGANINLFYKKDKDEVIASWLFLKHL
TSQKANEILFLQESSQFPTRPGYVNSKGFQDKIDDYKKFSEKQYDKLSTEERKELLKAKLLVFLNNEREQDEKDKIYFFS
PVFQKSYIARIVVNQLLVDCFLLKENDQEKIAQLFEIAQKKALA
>Mature_524_residues
MVSKDKLKIIAFFLFSFLVLTIIILFPKTSAKELRKKNYTTLKAKLEEYKDGNNWKKFKDKKIEIIFWHNLGKEGNNQEI
LQQIISKFQEKYQNITVKEEFKGNWGTLTKNINVALPANNEPHLIVSYPDFLVNYYESGKLVPLNDFIFHKNEEIKLEKE
EKENTFFYPIYEEESQIALGEEEKKWYSLPFTKNVELMFYNQTYLKNLLKRISKEDFGKIKKCFKDKQPETGELKDGITW
EELKTLSEIIKKHNPQKIPISYESESNLFIVSSEQKNIEYTNPKTTNDQLGVGFNNQDAQKMIRDLKEQFYDEKKYLITR
KLSGENHTLNLFAKQDILMNINSSNGLDYVNKVGFEVGVTSCPYWEKGKRKTLQQGANINLFYKKDKDEVIASWLFLKHL
TSQKANEILFLQESSQFPTRPGYVNSKGFQDKIDDYKKFSEKQYDKLSTEERKELLKAKLLVFLNNEREQDEKDKIYFFS
PVFQKSYIARIVVNQLLVDCFLLKENDQEKIAQLFEIAQKKALA

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61819; Mature: 61819

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSKDKLKIIAFFLFSFLVLTIIILFPKTSAKELRKKNYTTLKAKLEEYKDGNNWKKFKD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHCC
KKIEIIFWHNLGKEGNNQEILQQIISKFQEKYQNITVKEEFKGNWGTLTKNINVALPANN
CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEHHCCCCCCEEEECEEEEECCCC
EPHLIVSYPDFLVNYYESGKLVPLNDFIFHKNEEIKLEKEEKENTFFYPIYEEESQIALG
CCEEEEECHHHHHHHHCCCCEEEEHHHHEECCCCEEEECCCCCCCEEEEEECCCCCEECC
EEEKKWYSLPFTKNVELMFYNQTYLKNLLKRISKEDFGKIKKCFKDKQPETGELKDGITW
CCCCCEEECCCCCCEEEEEECHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCH
EELKTLSEIIKKHNPQKIPISYESESNLFIVSSEQKNIEYTNPKTTNDQLGVGFNNQDAQ
HHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCHHHH
KMIRDLKEQFYDEKKYLITRKLSGENHTLNLFAKQDILMNINSSNGLDYVNKVGFEVGVT
HHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECEEEEEECCCCCCCHHHHCCCEECCC
SCPYWEKGKRKTLQQGANINLFYKKDKDEVIASWLFLKHLTSQKANEILFLQESSQFPTR
CCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
PGYVNSKGFQDKIDDYKKFSEKQYDKLSTEERKELLKAKLLVFLNNEREQDEKDKIYFFS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEC
PVFQKSYIARIVVNQLLVDCFLLKENDQEKIAQLFEIAQKKALA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSKDKLKIIAFFLFSFLVLTIIILFPKTSAKELRKKNYTTLKAKLEEYKDGNNWKKFKD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHCC
KKIEIIFWHNLGKEGNNQEILQQIISKFQEKYQNITVKEEFKGNWGTLTKNINVALPANN
CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEHHCCCCCCEEEECEEEEECCCC
EPHLIVSYPDFLVNYYESGKLVPLNDFIFHKNEEIKLEKEEKENTFFYPIYEEESQIALG
CCEEEEECHHHHHHHHCCCCEEEEHHHHEECCCCEEEECCCCCCCEEEEEECCCCCEECC
EEEKKWYSLPFTKNVELMFYNQTYLKNLLKRISKEDFGKIKKCFKDKQPETGELKDGITW
CCCCCEEECCCCCCEEEEEECHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCH
EELKTLSEIIKKHNPQKIPISYESESNLFIVSSEQKNIEYTNPKTTNDQLGVGFNNQDAQ
HHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCHHHH
KMIRDLKEQFYDEKKYLITRKLSGENHTLNLFAKQDILMNINSSNGLDYVNKVGFEVGVT
HHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECEEEEEECCCCCCCHHHHCCCEECCC
SCPYWEKGKRKTLQQGANINLFYKKDKDEVIASWLFLKHLTSQKANEILFLQESSQFPTR
CCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
PGYVNSKGFQDKIDDYKKFSEKQYDKLSTEERKELLKAKLLVFLNNEREQDEKDKIYFFS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEC
PVFQKSYIARIVVNQLLVDCFLLKENDQEKIAQLFEIAQKKALA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA