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The map label for this gene is ugpE [C]

Identifier: 197294189

GI number: 197294189

Start: 28252

End: 29136

Strand: Reverse

Name: ugpE [C]

Synonym: PAa_0023

Alternate gene names: 197294189

Gene position: 29136-28252 (Counterclockwise)

Preceding gene: 197294190

Following gene: 197294188

Centisome position: 3.31

GC content: 24.97

Gene sequence:

>885_bases
ATGAATAAAATTCAATCAAATTTATTGATTTTAAAAAGAAAAGCCCCAAGCTTTTTTTTTATTTTTGTTAAATATTTTTT
TTTATTTTTTGTTTTGTTGTTTTTAGCTTTACCTTTTTATTGGATGTTAAACGTGGCTTTTCAAAAAGATAGTTTACATA
TCCATTGGTATCCTAAAAATTTTACAATTGAACATTTTAAAAATGTTTTAGTGGGTAATGATAAAATTGGTTTTTTGCCT
TCTTTTTTAGTGACTATTTTAGTAGTTTTTTTATCAACTATTTTAGGAATTATTGTTTCTGTTATTACTGCCTTTGCTTT
AAGTATTTTACAATTTAAAAACAAAAGAATTGTTTTCAGTCTTTTTTTGATTACTACCATGATTACTACTGAAAGTATGT
TTTTAATTAATTATCAAACAGTGGCTCGTTTAGGTTTAGTTGATCCTGGTAATGGTTCTATTGTTCCAGGAGGGGTTTAT
TTTGCTATGGTATTGCCTTTTTTAATTAATTTTGTTCATATTTTTTTATTAATGCAAAATATCAAAAAAATTCCTAAAGA
ATTATATTTATCTGTTAAAATTGATGGTAGTAGTAATTTTAATTTTTTGTTTAAAATTTTGATTCCTCTTTTAAAAGATA
ATTTAATTAATATTGTTATTTTTAGAGCAGTTGCTGCTTGGAATGCTTACTTATGGCCGCAACTTGTTGGCGGAAAATTG
TTAACAGTAATAGTGAGAAATTTTTTTGATTCCGATACGAAACCAAATTTAATTAATCAGCAAATGGCAGCCACTACTTT
AATCACAGTCCCTTTGGTTTTGTTATTTATTTTTTGCAAGAAATACGTTTTAGAAGGAAATTTAAACAGTGGTATCAAAG
GATAA

Upstream 100 bases:

>100_bases
CAACTATTATTTTGCTTTTGATTTCTATTTTTTTTACTCTTTTGAATTTTCACTTTATGAAAAAATTTAATCGAGAATAA
ATGTTTAAGGTAATAATGAA

Downstream 100 bases:

>100_bases
ATTAAAAATTATTGCTTTTTTCCTTTTTTCTTTCTTGGTTTTAACCATTATTATTTTATTTCCCAAAACTTCAGCTAAAG
AATTAAGAAAAAAAAATTAT

Product: Sugar transport system, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MNKIQSNLLILKRKAPSFFFIFVKYFFLFFVLLFLALPFYWMLNVAFQKDSLHIHWYPKNFTIEHFKNVLVGNDKIGFLP
SFLVTILVVFLSTILGIIVSVITAFALSILQFKNKRIVFSLFLITTMITTESMFLINYQTVARLGLVDPGNGSIVPGGVY
FAMVLPFLINFVHIFLLMQNIKKIPKELYLSVKIDGSSNFNFLFKILIPLLKDNLINIVIFRAVAAWNAYLWPQLVGGKL
LTVIVRNFFDSDTKPNLINQQMAATTLITVPLVLLFIFCKKYVLEGNLNSGIKG

Sequences:

>Translated_294_residues
MNKIQSNLLILKRKAPSFFFIFVKYFFLFFVLLFLALPFYWMLNVAFQKDSLHIHWYPKNFTIEHFKNVLVGNDKIGFLP
SFLVTILVVFLSTILGIIVSVITAFALSILQFKNKRIVFSLFLITTMITTESMFLINYQTVARLGLVDPGNGSIVPGGVY
FAMVLPFLINFVHIFLLMQNIKKIPKELYLSVKIDGSSNFNFLFKILIPLLKDNLINIVIFRAVAAWNAYLWPQLVGGKL
LTVIVRNFFDSDTKPNLINQQMAATTLITVPLVLLFIFCKKYVLEGNLNSGIKG
>Mature_294_residues
MNKIQSNLLILKRKAPSFFFIFVKYFFLFFVLLFLALPFYWMLNVAFQKDSLHIHWYPKNFTIEHFKNVLVGNDKIGFLP
SFLVTILVVFLSTILGIIVSVITAFALSILQFKNKRIVFSLFLITTMITTESMFLINYQTVARLGLVDPGNGSIVPGGVY
FAMVLPFLINFVHIFLLMQNIKKIPKELYLSVKIDGSSNFNFLFKILIPLLKDNLINIVIFRAVAAWNAYLWPQLVGGKL
LTVIVRNFFDSDTKPNLINQQMAATTLITVPLVLLFIFCKKYVLEGNLNSGIKG

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=240, Percent_Identity=25.4166666666667, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787571, Length=267, Percent_Identity=24.7191011235955, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33612; Mature: 33612

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIQSNLLILKRKAPSFFFIFVKYFFLFFVLLFLALPFYWMLNVAFQKDSLHIHWYPKN
CCCHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCC
FTIEHFKNVLVGNDKIGFLPSFLVTILVVFLSTILGIIVSVITAFALSILQFKNKRIVFS
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LFLITTMITTESMFLINYQTVARLGLVDPGNGSIVPGGVYFAMVLPFLINFVHIFLLMQN
HHHHHHHHHHCCEEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IKKIPKELYLSVKIDGSSNFNFLFKILIPLLKDNLINIVIFRAVAAWNAYLWPQLVGGKL
HHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTVIVRNFFDSDTKPNLINQQMAATTLITVPLVLLFIFCKKYVLEGNLNSGIKG
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNKIQSNLLILKRKAPSFFFIFVKYFFLFFVLLFLALPFYWMLNVAFQKDSLHIHWYPKN
CCCHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCC
FTIEHFKNVLVGNDKIGFLPSFLVTILVVFLSTILGIIVSVITAFALSILQFKNKRIVFS
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LFLITTMITTESMFLINYQTVARLGLVDPGNGSIVPGGVYFAMVLPFLINFVHIFLLMQN
HHHHHHHHHHCCEEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IKKIPKELYLSVKIDGSSNFNFLFKILIPLLKDNLINIVIFRAVAAWNAYLWPQLVGGKL
HHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTVIVRNFFDSDTKPNLINQQMAATTLITVPLVLLFIFCKKYVLEGNLNSGIKG
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]