| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is purE
Identifier: 170757832
GI number: 170757832
Start: 3116339
End: 3116818
Strand: Reverse
Name: purE
Synonym: CLD_1662
Alternate gene names: 170757832
Gene position: 3116818-3116339 (Counterclockwise)
Preceding gene: 170755102
Following gene: 170756658
Centisome position: 78.74
GC content: 33.12
Gene sequence:
>480_bases ATGAAAGTAGCTATTATTTTTGGAAGTAAATCTGATACTGATAAAATGAAGGGAGCGGCTAAAGCTTTAAAAGAGTTTAG TATAGAATATAAAGCTTACATACTTTCAGCACACAGAGTACCAGAAAAGTTGATGGAAACAATTGAAGATTTAGAAAAGG AAGGTTATGAATGTATAATTGCTGGGGCAGGTCTTGCAGCACATTTACCTGGGGTTATAGCTTCTCATACGATTCTTCCG GTTATAGGAGTGCCTATAGAAGCCGCAGTTGGAGGAATGGATTCACTTTTATCTATGGTTCAAATGCCTAAATCTATACC TGTAGCTACAGTGGGTATAAATAATAGTTATAATGCAGGAATGCTTGCGGTACAAATATTATCTTTAAAGTATGATGAAT TAGAAGAAAAACTTATAGAATATAGAAAAGATATGAAAGAAAAATTTATAAATGATAACAAAGAGGGAGTGGAGTTATAA
Upstream 100 bases:
>100_bases TTAGCTATGCTTTTGCAGTGCGCTTAAGTTCCGCTTTAGGATTCTCCATAGAAATCTTAGCGGAATTTTTTATATATTTA AATATAAGGAGGTCTAGTAC
Downstream 100 bases:
>100_bases TGGAAAAGAAGGATATGTTATATGAAGGAAAGGCTAAAAAAATATTTGGAACGGATGATAAGGATACAGTTGTTGTGTAT TATAAAGATGATGCCACAGC
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKVAIIFGSKSDTDKMKGAAKALKEFSIEYKAYILSAHRVPEKLMETIEDLEKEGYECIIAGAGLAAHLPGVIASHTILP VIGVPIEAAVGGMDSLLSMVQMPKSIPVATVGINNSYNAGMLAVQILSLKYDELEEKLIEYRKDMKEKFINDNKEGVEL
Sequences:
>Translated_159_residues MKVAIIFGSKSDTDKMKGAAKALKEFSIEYKAYILSAHRVPEKLMETIEDLEKEGYECIIAGAGLAAHLPGVIASHTILP VIGVPIEAAVGGMDSLLSMVQMPKSIPVATVGINNSYNAGMLAVQILSLKYDELEEKLIEYRKDMKEKFINDNKEGVEL >Mature_159_residues MKVAIIFGSKSDTDKMKGAAKALKEFSIEYKAYILSAHRVPEKLMETIEDLEKEGYECIIAGAGLAAHLPGVIASHTILP VIGVPIEAAVGGMDSLLSMVQMPKSIPVATVGINNSYNAGMLAVQILSLKYDELEEKLIEYRKDMKEKFINDNKEGVEL
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=154, Percent_Identity=41.5584415584416, Blast_Score=119, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6324702, Length=131, Percent_Identity=51.1450381679389, Blast_Score=128, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 17343; Mature: 17343
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAIIFGSKSDTDKMKGAAKALKEFSIEYKAYILSAHRVPEKLMETIEDLEKEGYECII CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEE AGAGLAAHLPGVIASHTILPVIGVPIEAAVGGMDSLLSMVQMPKSIPVATVGINNSYNAG ECCCHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCH MLAVQILSLKYDELEEKLIEYRKDMKEKFINDNKEGVEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKVAIIFGSKSDTDKMKGAAKALKEFSIEYKAYILSAHRVPEKLMETIEDLEKEGYECII CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEE AGAGLAAHLPGVIASHTILPVIGVPIEAAVGGMDSLLSMVQMPKSIPVATVGINNSYNAG ECCCHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCH MLAVQILSLKYDELEEKLIEYRKDMKEKFINDNKEGVEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]