| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757790
Identifier: 170757790
GI number: 170757790
Start: 3279984
End: 3281069
Strand: Reverse
Name: 170757790
Synonym: CLD_1514
Alternate gene names: NA
Gene position: 3281069-3279984 (Counterclockwise)
Preceding gene: 170754296
Following gene: 170756763
Centisome position: 82.89
GC content: 28.82
Gene sequence:
>1086_bases ATGGCAAAATGTAAAGTAGAATTTTATAAAAAAAATGGCTACCAAGCCTTTGAAAATGGTGATGCTAATAAAATAACCTT AGAACATTGTTTAGTGTCAGTTAAAATAAATAGAACTTTAACTACACCTACTGCTGAAGCTACGGTTACAGCACAATATG AGAATCTACCCACAGCTATTTTTGCAGGAGGAACGCAAGGTGTAATAGATAATTTTGCACAGATAAAAATTTATATAGAG GATGTACTTCAATTTACAGGTGTAATTAAAAAATACGATTATAATACACTTGATAAAACAATAGAAATTACTTGTCATGA TATGTATTATAGAATGTTAAATTTATGTGATAAGGAATTAAAATTTTATAATAAAACCGCAGCAGATATAATTTCTACTG TTGTATCAGATGCTAAATGTAGTTTTCAAAGAGGTGGAGGAAATAATTATACTGTGCCTAAATTAGAATGTGAAATAGGT ACTATGTATAATGATATAATTAGTAATTTGGTAGAAACTATGTATGCCAGAATAAGGGCAAACAAAAACGGTACAATAAT ATTAGAAGAGCAATATCCTGCTTATAATGAATCAAATCATGAAGCAAATCACCATGATTATGTTTTATCTGTTGATACTA ATTTATCTAGTGAAACTGCCAGTAGAGATTCTAGTTTAATGAGAAATATATTAAAGATTTGTTGTAATGATAAATATTCT ATTTTTGAATCCAAAGCTATGACTAGTTATTTAAATGGTGAAAGATGGGTAGATATAATTGATAATCCATTAGCTAGTAC TCCATTATTAAAACAAAAGGTAGCAGGATATAAATTTTTAGATATGTGGAGGGAGAGTACTGCTTTAAATGTAGTACCAG TAACTGGAATACCTAATATTGATTTAGGACAAGTAGTTAAATTAGTAAATAATCAAAGAGGTAATGGCTGGTATTTAATT GTAGGAATAAGTACAGAAATAAATGCTGACACATATGTAGATACATTGCAATTACAAGGTATGCGAGATAAAACAAAAGT GTATGACCAATGTATCCAAATAGGCAGTGGAAGATTGAAACAATAG
Upstream 100 bases:
>100_bases CAAAATAAGTTTGAGATAGATACTCCTATCGAAGGTGATATATATTATATAAATTTAGAGCTTTTATGTAATCATGAAGC TAGTGGATGGGTGAAAGATA
Downstream 100 bases:
>100_bases TAGGTGATTAAAATGGCACATATGGGATATAAAAATTTTAGGGAGCCAGTAGTATATATTTTAAATCAAGAATTAAGAAA AAGAAATTTCAAAAATCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MAKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRTLTTPTAEATVTAQYENLPTAIFAGGTQGVIDNFAQIKIYIE DVLQFTGVIKKYDYNTLDKTIEITCHDMYYRMLNLCDKELKFYNKTAADIISTVVSDAKCSFQRGGGNNYTVPKLECEIG TMYNDIISNLVETMYARIRANKNGTIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYS IFESKAMTSYLNGERWVDIIDNPLASTPLLKQKVAGYKFLDMWRESTALNVVPVTGIPNIDLGQVVKLVNNQRGNGWYLI VGISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLKQ
Sequences:
>Translated_361_residues MAKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRTLTTPTAEATVTAQYENLPTAIFAGGTQGVIDNFAQIKIYIE DVLQFTGVIKKYDYNTLDKTIEITCHDMYYRMLNLCDKELKFYNKTAADIISTVVSDAKCSFQRGGGNNYTVPKLECEIG TMYNDIISNLVETMYARIRANKNGTIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYS IFESKAMTSYLNGERWVDIIDNPLASTPLLKQKVAGYKFLDMWRESTALNVVPVTGIPNIDLGQVVKLVNNQRGNGWYLI VGISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLKQ >Mature_360_residues AKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRTLTTPTAEATVTAQYENLPTAIFAGGTQGVIDNFAQIKIYIED VLQFTGVIKKYDYNTLDKTIEITCHDMYYRMLNLCDKELKFYNKTAADIISTVVSDAKCSFQRGGGNNYTVPKLECEIGT MYNDIISNLVETMYARIRANKNGTIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYSI FESKAMTSYLNGERWVDIIDNPLASTPLLKQKVAGYKFLDMWRESTALNVVPVTGIPNIDLGQVVKLVNNQRGNGWYLIV GISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40743; Mature: 40612
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRTLTTPTAEATVTAQYENLPTAI CCCEEEEEEECCCCEECCCCCCCEEEHHHEEEEEEECCEECCCCCCEEEEEECCCCCEEE FAGGTQGVIDNFAQIKIYIEDVLQFTGVIKKYDYNTLDKTIEITCHDMYYRMLNLCDKEL EECCCHHHHCCHHHEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHH KFYNKTAADIISTVVSDAKCSFQRGGGNNYTVPKLECEIGTMYNDIISNLVETMYARIRA HHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC NKNGTIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYS CCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH IFESKAMTSYLNGERWVDIIDNPLASTPLLKQKVAGYKFLDMWRESTALNVVPVTGIPNI HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCC DLGQVVKLVNNQRGNGWYLIVGISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLK CHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCC Q C >Mature Secondary Structure AKCKVEFYKKNGYQAFENGDANKITLEHCLVSVKINRTLTTPTAEATVTAQYENLPTAI CCEEEEEEECCCCEECCCCCCCEEEHHHEEEEEEECCEECCCCCCEEEEEECCCCCEEE FAGGTQGVIDNFAQIKIYIEDVLQFTGVIKKYDYNTLDKTIEITCHDMYYRMLNLCDKEL EECCCHHHHCCHHHEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHH KFYNKTAADIISTVVSDAKCSFQRGGGNNYTVPKLECEIGTMYNDIISNLVETMYARIRA HHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC NKNGTIILEEQYPAYNESNHEANHHDYVLSVDTNLSSETASRDSSLMRNILKICCNDKYS CCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH IFESKAMTSYLNGERWVDIIDNPLASTPLLKQKVAGYKFLDMWRESTALNVVPVTGIPNI HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCC DLGQVVKLVNNQRGNGWYLIVGISTEINADTYVDTLQLQGMRDKTKVYDQCIQIGSGRLK CHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA