Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170756763

Identifier: 170756763

GI number: 170756763

Start: 3279630

End: 3279971

Strand: Reverse

Name: 170756763

Synonym: CLD_1515

Alternate gene names: NA

Gene position: 3279971-3279630 (Counterclockwise)

Preceding gene: 170757790

Following gene: 170755770

Centisome position: 82.86

GC content: 25.15

Gene sequence:

>342_bases
ATGGCACATATGGGATATAAAAATTTTAGGGAGCCAGTAGTATATATTTTAAATCAAGAATTAAGAAAAAGAAATTTCAA
AAATCAAATAAATACAAATGAAGATTCAAAATATGCTGGGGAATTACCCGAATATCCATGTAGAATAATTAGAGATAGTA
ATAATAAAGCATATAAATTTATATATGCTAATGGAACAGATATGCAATGGCAAGAAGAACTAATTAGAAATGCAGAAGGT
AAGGTATATAGAATTAAAACAACGTACCCTAATAATACAAATAAAACAATACGATTAATTAAAGATAATCATGGTAAATT
AGAAACAATAGATTATGTATAG

Upstream 100 bases:

>100_bases
AGATACATTGCAATTACAAGGTATGCGAGATAAAACAAAAGTGTATGACCAATGTATCCAAATAGGCAGTGGAAGATTGA
AACAATAGTAGGTGATTAAA

Downstream 100 bases:

>100_bases
GAGGTGGCAATAATATGGGATTACCTTCCTATGTAGTCAACTTTGATGAACTATCAGATCTTATTAAAGATTATTTACAA
AATGGTGTGAAAGTTGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKFIYANGTDMQWQEELIRNAEG
KVYRIKTTYPNNTNKTIRLIKDNHGKLETIDYV

Sequences:

>Translated_113_residues
MAHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKFIYANGTDMQWQEELIRNAEG
KVYRIKTTYPNNTNKTIRLIKDNHGKLETIDYV
>Mature_112_residues
AHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKFIYANGTDMQWQEELIRNAEGK
VYRIKTTYPNNTNKTIRLIKDNHGKLETIDYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13510; Mature: 13379

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKF
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE
IYANGTDMQWQEELIRNAEGKVYRIKTTYPNNTNKTIRLIKDNHGKLETIDYV
EEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCC
>Mature Secondary Structure 
AHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKF
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE
IYANGTDMQWQEELIRNAEGKVYRIKTTYPNNTNKTIRLIKDNHGKLETIDYV
EEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA