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The map label for this gene is etfB [H]

Identifier: 170757646

GI number: 170757646

Start: 1118940

End: 1119728

Strand: Direct

Name: etfB [H]

Synonym: CLD_3559

Alternate gene names: 170757646

Gene position: 1118940-1119728 (Clockwise)

Preceding gene: 170756582

Following gene: 170754986

Centisome position: 28.27

GC content: 34.09

Gene sequence:

>789_bases
ATGGATATTTTAGTATGTATAAAACAAGTTCCGGGAACATCAAAAGTAGAGGTGGATTCAGTAACAGGAGTATTAAAAAG
AGATGGTGTAGATTCAAAGATGAACCCATACGATCTATATGCTTTAGAAACAGCATTAAGACTTAAAGAAAAATTTGGAG
GAGTTGTAAAGGTAATAAGCATGGGACCTCCTCAAGCAGCAGAGGTTATAAAAGAAGCTTATATGATGGGAGCCGATGAA
GGGGTACTTCTTTCAGATAGAAAATTTGCAGGAGCGGATGTTTTATCAACAGCCTATACCATATCTCAAGGTGTAAGAGA
AATGGGTAAATTTGACCTAATACTTTGTGGAAAACAAACCACGGATGGTGATACAGCACAAGTTGGACCAGAGATGGCAG
AATATCTAGATATAGCTCATATAGCAAATGTAATAAAAATAGAAGAAGTTAAAAATGATTCTGTAGTAGTGGAAATGGAT
ATGCCAAACACAATAGAAGTAGCAGAGATAAAATATCCCTGTCTTTTAACAGTAGAAAAAGATATATGTGAACCAAGACT
TCCATCCTACAGAAAGAAACTAGAGACAAAGGATAAAGAAGTTAAAATGTTGAGCTTAAAAGATTTTGAAGATAAAAATG
AAAATATGTATGGATTAAATGGATCACCAACACAGGTAGAGAGAATATTTCCACCAGCAGTAAATACAGATAAAGAAATG
TGGACAGGGAGCGGAGAAGAATTAGGAAATAAGTTAACAGCAAAACTTAAAGAATTGAAATTTGTATAA

Upstream 100 bases:

>100_bases
GGGAAAAGACGCTAAAGTAGCGGTAATACCTGATGGTGTGTCTGTAATTGTAGGATAAAAATTTATTATTAAACATAAAT
AGATTTTGGAGGTAATTTAT

Downstream 100 bases:

>100_bases
AATAAAGTAATACTAATGGGAGGCTTTTAATATGGGAAAATTAGTAGTAAATGAAGAAAAATTAACTCCTTCAATTATAG
GGGAATTAGTTAAAATATGT

Product: electron transfer flavoprotein, beta subunit/FixA family protein

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MDILVCIKQVPGTSKVEVDSVTGVLKRDGVDSKMNPYDLYALETALRLKEKFGGVVKVISMGPPQAAEVIKEAYMMGADE
GVLLSDRKFAGADVLSTAYTISQGVREMGKFDLILCGKQTTDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMD
MPNTIEVAEIKYPCLLTVEKDICEPRLPSYRKKLETKDKEVKMLSLKDFEDKNENMYGLNGSPTQVERIFPPAVNTDKEM
WTGSGEELGNKLTAKLKELKFV

Sequences:

>Translated_262_residues
MDILVCIKQVPGTSKVEVDSVTGVLKRDGVDSKMNPYDLYALETALRLKEKFGGVVKVISMGPPQAAEVIKEAYMMGADE
GVLLSDRKFAGADVLSTAYTISQGVREMGKFDLILCGKQTTDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMD
MPNTIEVAEIKYPCLLTVEKDICEPRLPSYRKKLETKDKEVKMLSLKDFEDKNENMYGLNGSPTQVERIFPPAVNTDKEM
WTGSGEELGNKLTAKLKELKFV
>Mature_262_residues
MDILVCIKQVPGTSKVEVDSVTGVLKRDGVDSKMNPYDLYALETALRLKEKFGGVVKVISMGPPQAAEVIKEAYMMGADE
GVLLSDRKFAGADVLSTAYTISQGVREMGKFDLILCGKQTTDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMD
MPNTIEVAEIKYPCLLTVEKDICEPRLPSYRKKLETKDKEVKMLSLKDFEDKNENMYGLNGSPTQVERIFPPAVNTDKEM
WTGSGEELGNKLTAKLKELKFV

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=219, Percent_Identity=31.5068493150685, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI62420877, Length=205, Percent_Identity=32.1951219512195, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI87081682, Length=233, Percent_Identity=30.9012875536481, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI2367123, Length=232, Percent_Identity=28.448275862069, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25141345, Length=213, Percent_Identity=30.0469483568075, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6321646, Length=223, Percent_Identity=27.8026905829596, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24651147, Length=242, Percent_Identity=30.9917355371901, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24651145, Length=242, Percent_Identity=30.9917355371901, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28994; Mature: 28994

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILVCIKQVPGTSKVEVDSVTGVLKRDGVDSKMNPYDLYALETALRLKEKFGGVVKVIS
CCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
MGPPQAAEVIKEAYMMGADEGVLLSDRKFAGADVLSTAYTISQGVREMGKFDLILCGKQT
CCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCC
TDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMDMPNTIEVAEIKYPCLLTVEK
CCCCHHHCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCEEEEEECCCEEEEECH
DICEPRLPSYRKKLETKDKEVKMLSLKDFEDKNENMYGLNGSPTQVERIFPPAVNTDKEM
HHCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCCCCCCHHHEECCCCCCCCHHH
WTGSGEELGNKLTAKLKELKFV
HCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDILVCIKQVPGTSKVEVDSVTGVLKRDGVDSKMNPYDLYALETALRLKEKFGGVVKVIS
CCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
MGPPQAAEVIKEAYMMGADEGVLLSDRKFAGADVLSTAYTISQGVREMGKFDLILCGKQT
CCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCC
TDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMDMPNTIEVAEIKYPCLLTVEK
CCCCHHHCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCEEEEEECCCEEEEECH
DICEPRLPSYRKKLETKDKEVKMLSLKDFEDKNENMYGLNGSPTQVERIFPPAVNTDKEM
HHCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCCCCCCHHHEECCCCCCCCHHH
WTGSGEELGNKLTAKLKELKFV
HCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA