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The map label for this gene is yxdM [H]

Identifier: 170757552

GI number: 170757552

Start: 1561432

End: 1563240

Strand: Direct

Name: yxdM [H]

Synonym: CLD_3141

Alternate gene names: 170757552

Gene position: 1561432-1563240 (Clockwise)

Preceding gene: 170756814

Following gene: 170755032

Centisome position: 39.45

GC content: 20.73

Gene sequence:

>1809_bases
ATGAGTTTTAATACTATAATTATAAATAACATAAAAAGGAATTTGAGGAAATATAGTGTTTTCATATTAAGTGGTGTAGT
GTCTGTGATAGTATATTATTTTTTTTCTTTGATTTTAAATAATATAGAATTGATACAGGATCCATTTACTATAGGCTTTG
TGGATAGTTTGAATTTTATACAATTTTTATTAATAATGGGTATATTTTTTTTGACGGATTATTCTATAAATATATTTCTA
GAGTCTAGAATAGAAGAATTTAAAATATTTTATAAGTTGGGGATTTCTCAGAACAAGATGAAAAAGATTATTTTTATAGA
AAGCTTATTTTTAGGTATTATAATAACGATATTTGGAATTATAATAGCCTTTGTATTTTCTAAATTTATGATGATGGGCA
TAGGAAGAACTTTAAATAAAAAAATAAATACAATAGGAAATTTTAAGGCTATAAAAGATACAACTAAAGTTTTTTTTATT
ATATTTATTATATGTGGTATAACTAAGGGAAGGTATATAAAAGGAATTAATAAGATATATAAAGCAAGAAAACCATCCCT
GTTTTTAAGTATGGTTTGTATAATAATGCTTATATGTTTATTTATAATAAGCCAAAAAATCAATTATTTTAAATCCACAG
GAGGAATAAGTTTATTCTTTATATTGGGATTTTTATATACTTTATTATCTTTAACGGAGATGTTTCCTTATGTATTGACT
AGAATATCAAAAATTAAGCTAATATATATGGATAAAGTAAATATGATTTTTATATCAAATGTTAGAGAAAAAATTCTTCA
AAATAGAAATGTTCTTTTTATTATGACTATGTTTTTGTCTATATCTATATTTATATTTGGAATTTTATATGTTCAAAAAG
ATCTAATAGATAAAAAGAAGGATATTTTATATCCTATTGATATAGCTTATGTAGTTAAAGAAAGAGATTATAATAATATT
ATAGATAACAAATTAAAAGAAAATAGTATTAATTTTCAAAAGGTAAAAGTTACATTTTATGATGTAGAAAGTGCAAAATA
TAGCGTTATATCAGAATCGGAATACAATAAAATAGCTAATAAACTTTCTTATCCAATTTATAATATAAAGCAAGGTAAGG
CTGTAATATTATCTAATATTGATATGAGTGAAGAAGATATTAAAAAATATTATTTCAATGAAGTAATAAATATTAATGGT
AATAAAGTTAAGATAGATAAAATAGGAGAAAAAAGTATATTTCAAAGTAAGACTATGGGAAATATTATTATAGTAAAAGA
TAGTTCTTTAATAGCATTACCAAAGGATAAAAAGATAAATTATTATATGTATAATATACAAAGTATTAAAAAAAGTATAA
AAGAATTAGAAGGTATAAAAAAAAGTTTATCTGGTGAAAAAATATATATAAAGCAGCTAGAATTAATGAAAGAAAGAGGA
ACAGCCTATGGTTTTTTCTATCTTTGTAGTTCTGTAGCTTTAGTTTTTTTTCTTATGGGAGTAAGCTTTTTATACTATAA
ATTTTATGATGACATAAAGAAAGAAAAAGATAAATATGATATATTGATAAATTTGGGGATATCTAAAAAAACAGTAAATT
CTATAATAAATAAAGAAATGTTAGTTATGTTTTTCGTACCTTTTTTAATTAGTTCATTGAATTTGTTTTTTATATTTAAG
TTAAATAGATTGATATATAATTACAAAGGAGATGTTTCTGAAATACATGTTTTTATAATATATCTATTTATATATACAGT
TTATTTTATGTTTTGGAAAAGGAAGATTATAGAAGAAGTAAATGAATAA

Upstream 100 bases:

>100_bases
AAAGATGGTGAAATATATAGTGAAATTTATAAGGGAGAAAATCAGGAAAACTTTTATAAGGATATATTAAATTTTAATAT
GTTCTTAGGAGGAAGAATCA

Downstream 100 bases:

>100_bases
ATGTGGTATCAATAGTGTATTGAATAACATATAATGGTAAAGAAATTAATATTTAGGAAAGATATAGTATGAATTTTATA
CCCTTTGATAATTATAATAT

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 601

Protein sequence:

>602_residues
MSFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELIQDPFTIGFVDSLNFIQFLLIMGIFFLTDYSINIFL
ESRIEEFKIFYKLGISQNKMKKIIFIESLFLGIIITIFGIIIAFVFSKFMMMGIGRTLNKKINTIGNFKAIKDTTKVFFI
IFIICGITKGRYIKGINKIYKARKPSLFLSMVCIIMLICLFIISQKINYFKSTGGISLFFILGFLYTLLSLTEMFPYVLT
RISKIKLIYMDKVNMIFISNVREKILQNRNVLFIMTMFLSISIFIFGILYVQKDLIDKKKDILYPIDIAYVVKERDYNNI
IDNKLKENSINFQKVKVTFYDVESAKYSVISESEYNKIANKLSYPIYNIKQGKAVILSNIDMSEEDIKKYYFNEVINING
NKVKIDKIGEKSIFQSKTMGNIIIVKDSSLIALPKDKKINYYMYNIQSIKKSIKELEGIKKSLSGEKIYIKQLELMKERG
TAYGFFYLCSSVALVFFLMGVSFLYYKFYDDIKKEKDKYDILINLGISKKTVNSIINKEMLVMFFVPFLISSLNLFFIFK
LNRLIYNYKGDVSEIHVFIIYLFIYTVYFMFWKRKIIEEVNE

Sequences:

>Translated_602_residues
MSFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELIQDPFTIGFVDSLNFIQFLLIMGIFFLTDYSINIFL
ESRIEEFKIFYKLGISQNKMKKIIFIESLFLGIIITIFGIIIAFVFSKFMMMGIGRTLNKKINTIGNFKAIKDTTKVFFI
IFIICGITKGRYIKGINKIYKARKPSLFLSMVCIIMLICLFIISQKINYFKSTGGISLFFILGFLYTLLSLTEMFPYVLT
RISKIKLIYMDKVNMIFISNVREKILQNRNVLFIMTMFLSISIFIFGILYVQKDLIDKKKDILYPIDIAYVVKERDYNNI
IDNKLKENSINFQKVKVTFYDVESAKYSVISESEYNKIANKLSYPIYNIKQGKAVILSNIDMSEEDIKKYYFNEVINING
NKVKIDKIGEKSIFQSKTMGNIIIVKDSSLIALPKDKKINYYMYNIQSIKKSIKELEGIKKSLSGEKIYIKQLELMKERG
TAYGFFYLCSSVALVFFLMGVSFLYYKFYDDIKKEKDKYDILINLGISKKTVNSIINKEMLVMFFVPFLISSLNLFFIFK
LNRLIYNYKGDVSEIHVFIIYLFIYTVYFMFWKRKIIEEVNE
>Mature_601_residues
SFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELIQDPFTIGFVDSLNFIQFLLIMGIFFLTDYSINIFLE
SRIEEFKIFYKLGISQNKMKKIIFIESLFLGIIITIFGIIIAFVFSKFMMMGIGRTLNKKINTIGNFKAIKDTTKVFFII
FIICGITKGRYIKGINKIYKARKPSLFLSMVCIIMLICLFIISQKINYFKSTGGISLFFILGFLYTLLSLTEMFPYVLTR
ISKIKLIYMDKVNMIFISNVREKILQNRNVLFIMTMFLSISIFIFGILYVQKDLIDKKKDILYPIDIAYVVKERDYNNII
DNKLKENSINFQKVKVTFYDVESAKYSVISESEYNKIANKLSYPIYNIKQGKAVILSNIDMSEEDIKKYYFNEVININGN
KVKIDKIGEKSIFQSKTMGNIIIVKDSSLIALPKDKKINYYMYNIQSIKKSIKELEGIKKSLSGEKIYIKQLELMKERGT
AYGFFYLCSSVALVFFLMGVSFLYYKFYDDIKKEKDKYDILINLGISKKTVNSIINKEMLVMFFVPFLISSLNLFFIFKL
NRLIYNYKGDVSEIHVFIIYLFIYTVYFMFWKRKIIEEVNE

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 70643; Mature: 70512

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELIQDPFTIGFVDSLNFI
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEHHHHHHHH
QFLLIMGIFFLTDYSINIFLESRIEEFKIFYKLGISQNKMKKIIFIESLFLGIIITIFGI
HHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIAFVFSKFMMMGIGRTLNKKINTIGNFKAIKDTTKVFFIIFIICGITKGRYIKGINKIY
HHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KARKPSLFLSMVCIIMLICLFIISQKINYFKSTGGISLFFILGFLYTLLSLTEMFPYVLT
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RISKIKLIYMDKVNMIFISNVREKILQNRNVLFIMTMFLSISIFIFGILYVQKDLIDKKK
HHHHEEEEEECCCCEEEHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DILYPIDIAYVVKERDYNNIIDNKLKENSINFQKVKVTFYDVESAKYSVISESEYNKIAN
CCEEEEEEEEEEECCCCCHHHHCCHHCCCCCEEEEEEEEEEECCCCEEEECCHHHHHHHH
KLSYPIYNIKQGKAVILSNIDMSEEDIKKYYFNEVININGNKVKIDKIGEKSIFQSKTMG
HHCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHCCCC
NIIIVKDSSLIALPKDKKINYYMYNIQSIKKSIKELEGIKKSLSGEKIYIKQLELMKERG
CEEEEECCCEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCC
TAYGFFYLCSSVALVFFLMGVSFLYYKFYDDIKKEKDKYDILINLGISKKTVNSIINKEM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH
LVMFFVPFLISSLNLFFIFKLNRLIYNYKGDVSEIHVFIIYLFIYTVYFMFWKRKIIEEV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NE
CC
>Mature Secondary Structure 
SFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELIQDPFTIGFVDSLNFI
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEHHHHHHHH
QFLLIMGIFFLTDYSINIFLESRIEEFKIFYKLGISQNKMKKIIFIESLFLGIIITIFGI
HHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIAFVFSKFMMMGIGRTLNKKINTIGNFKAIKDTTKVFFIIFIICGITKGRYIKGINKIY
HHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KARKPSLFLSMVCIIMLICLFIISQKINYFKSTGGISLFFILGFLYTLLSLTEMFPYVLT
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RISKIKLIYMDKVNMIFISNVREKILQNRNVLFIMTMFLSISIFIFGILYVQKDLIDKKK
HHHHEEEEEECCCCEEEHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DILYPIDIAYVVKERDYNNIIDNKLKENSINFQKVKVTFYDVESAKYSVISESEYNKIAN
CCEEEEEEEEEEECCCCCHHHHCCHHCCCCCEEEEEEEEEEECCCCEEEECCHHHHHHHH
KLSYPIYNIKQGKAVILSNIDMSEEDIKKYYFNEVININGNKVKIDKIGEKSIFQSKTMG
HHCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHCCCC
NIIIVKDSSLIALPKDKKINYYMYNIQSIKKSIKELEGIKKSLSGEKIYIKQLELMKERG
CEEEEECCCEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCC
TAYGFFYLCSSVALVFFLMGVSFLYYKFYDDIKKEKDKYDILINLGISKKTVNSIINKEM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH
LVMFFVPFLISSLNLFFIFKLNRLIYNYKGDVSEIHVFIIYLFIYTVYFMFWKRKIIEEV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]