Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is yxdL [H]

Identifier: 170756814

GI number: 170756814

Start: 1560798

End: 1561442

Strand: Direct

Name: yxdL [H]

Synonym: CLD_3142

Alternate gene names: 170756814

Gene position: 1560798-1561442 (Clockwise)

Preceding gene: 170756090

Following gene: 170757552

Centisome position: 39.43

GC content: 28.53

Gene sequence:

>645_bases
ATGGGTCCCTCTGGTAGCGGTAAAAGTACTCTTTTAAAATTAGCCTCTACTATAGAAAAGCCTTCTGCAGGGAGTATCCT
TATAAATGGGATAGATGTAAAAAAAATTAGCGAGGAAGAAAGAAGGAAATTTAGAAGAAAAAAATTTTCTTTTGTATTTC
AAGATGTAAAATTAATAAAAAATTTGACTATAAAAGATAATATCATTTATCCAATGCTTTTGGAGAATAACGACAAAAGG
TACATAGAAAAAGAAGCAGATAAGATTTTAAAGCTTTTACATATAGAAGATTTACAACATAGAATGGTATGGGAATTATC
AGGAGGACAAAATCAAAAGGGTGAGATAGGAAGAGCATTAGTTCAGAGAAAGAAAATTATGTTTTTAGATGAGCCTACAG
GAAGATTAGATTTTAATTCCCGAAAGAAAATTATGGAGATATTTAAGAGTGTTAATGCAAATGAGAAATGTACCATTTTT
CTTGTAACTCATGACCCTTTTGTAGCTAGTTATGCTAAAAGAGTATTTTTTATAAAAGATGGTGAAATATATAGTGAAAT
TTATAAGGGAGAAAATCAGGAAAACTTTTATAAGGATATATTAAATTTTAATATGTTCTTAGGAGGAAGAATCAATGAGT
TTTAA

Upstream 100 bases:

>100_bases
TGAATTAAAAGAAGTTTATAAAATATATGGTACAGAAAAAGGAAAAATAGCTTTAAAAAATATAAATTTATCCGTAAATG
AAGGGGAATTTATATCCATA

Downstream 100 bases:

>100_bases
TACTATAATTATAAATAACATAAAAAGGAATTTGAGGAAATATAGTGTTTTCATATTAAGTGGTGTAGTGTCTGTGATAG
TATATTATTTTTTTTCTTTG

Product: peptide ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MGPSGSGKSTLLKLASTIEKPSAGSILINGIDVKKISEEERRKFRRKKFSFVFQDVKLIKNLTIKDNIIYPMLLENNDKR
YIEKEADKILKLLHIEDLQHRMVWELSGGQNQKGEIGRALVQRKKIMFLDEPTGRLDFNSRKKIMEIFKSVNANEKCTIF
LVTHDPFVASYAKRVFFIKDGEIYSEIYKGENQENFYKDILNFNMFLGGRINEF

Sequences:

>Translated_214_residues
MGPSGSGKSTLLKLASTIEKPSAGSILINGIDVKKISEEERRKFRRKKFSFVFQDVKLIKNLTIKDNIIYPMLLENNDKR
YIEKEADKILKLLHIEDLQHRMVWELSGGQNQKGEIGRALVQRKKIMFLDEPTGRLDFNSRKKIMEIFKSVNANEKCTIF
LVTHDPFVASYAKRVFFIKDGEIYSEIYKGENQENFYKDILNFNMFLGGRINEF
>Mature_213_residues
GPSGSGKSTLLKLASTIEKPSAGSILINGIDVKKISEEERRKFRRKKFSFVFQDVKLIKNLTIKDNIIYPMLLENNDKRY
IEKEADKILKLLHIEDLQHRMVWELSGGQNQKGEIGRALVQRKKIMFLDEPTGRLDFNSRKKIMEIFKSVNANEKCTIFL
VTHDPFVASYAKRVFFIKDGEIYSEIYKGENQENFYKDILNFNMFLGGRINEF

Specific function: Part of the ABC transporter complex YxdLM which could be involved in peptide resistance. Responsible for energy coupling to the transport system (Probable) [H]

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI215820660, Length=194, Percent_Identity=31.9587628865979, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI20143975, Length=194, Percent_Identity=31.9587628865979, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI9955963, Length=188, Percent_Identity=31.9148936170213, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27477115, Length=184, Percent_Identity=28.804347826087, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI148612844, Length=206, Percent_Identity=29.6116504854369, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI255708477, Length=206, Percent_Identity=29.6116504854369, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI45446740, Length=164, Percent_Identity=28.0487804878049, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI47078218, Length=164, Percent_Identity=28.0487804878049, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI46592971, Length=168, Percent_Identity=32.7380952380952, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI46592956, Length=168, Percent_Identity=32.7380952380952, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI46592915, Length=168, Percent_Identity=32.7380952380952, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI46592898, Length=168, Percent_Identity=32.7380952380952, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI46592978, Length=168, Percent_Identity=32.7380952380952, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI46592964, Length=168, Percent_Identity=32.7380952380952, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI116734710, Length=164, Percent_Identity=28.0487804878049, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI9961252, Length=219, Percent_Identity=26.4840182648402, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI4505771, Length=219, Percent_Identity=26.4840182648402, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI27881501, Length=183, Percent_Identity=26.775956284153, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI30795238, Length=183, Percent_Identity=26.775956284153, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI153792144, Length=149, Percent_Identity=29.5302013422819, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI42741659, Length=151, Percent_Identity=35.7615894039735, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI42490749, Length=166, Percent_Identity=31.9277108433735, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI156105685, Length=189, Percent_Identity=26.4550264550265, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI105990541, Length=185, Percent_Identity=24.8648648648649, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI31657092, Length=166, Percent_Identity=26.5060240963855, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI27262624, Length=161, Percent_Identity=30.4347826086957, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI27262626, Length=161, Percent_Identity=30.4347826086957, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787105, Length=183, Percent_Identity=36.0655737704918, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1786398, Length=187, Percent_Identity=33.1550802139037, Blast_Score=116, Evalue=9e-28,
Organism=Escherichia coli, GI87081834, Length=187, Percent_Identity=31.5508021390374, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786703, Length=186, Percent_Identity=33.3333333333333, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1787029, Length=188, Percent_Identity=34.5744680851064, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI1788761, Length=188, Percent_Identity=34.0425531914894, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1789873, Length=187, Percent_Identity=32.0855614973262, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789032, Length=184, Percent_Identity=33.695652173913, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI87081791, Length=219, Percent_Identity=29.6803652968037, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87081709, Length=165, Percent_Identity=30.9090909090909, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1786253, Length=198, Percent_Identity=31.8181818181818, Blast_Score=100, Evalue=5e-23,
Organism=Escherichia coli, GI1787712, Length=184, Percent_Identity=33.695652173913, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1789672, Length=193, Percent_Identity=33.160621761658, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787089, Length=190, Percent_Identity=32.6315789473684, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788225, Length=192, Percent_Identity=32.2916666666667, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787370, Length=215, Percent_Identity=27.906976744186, Blast_Score=97, Evalue=5e-22,
Organism=Escherichia coli, GI87082267, Length=182, Percent_Identity=30.2197802197802, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1786872, Length=200, Percent_Identity=32, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1787164, Length=184, Percent_Identity=32.6086956521739, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1790544, Length=208, Percent_Identity=29.3269230769231, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1786345, Length=209, Percent_Identity=27.7511961722488, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1786563, Length=165, Percent_Identity=30.9090909090909, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788644, Length=191, Percent_Identity=30.3664921465969, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1788450, Length=188, Percent_Identity=28.7234042553192, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786803, Length=207, Percent_Identity=28.0193236714976, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790467, Length=184, Percent_Identity=28.804347826087, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1786698, Length=205, Percent_Identity=29.2682926829268, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI48994997, Length=193, Percent_Identity=31.0880829015544, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1789891, Length=197, Percent_Identity=29.9492385786802, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1789963, Length=225, Percent_Identity=28, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788506, Length=200, Percent_Identity=28, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI48994883, Length=217, Percent_Identity=27.1889400921659, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789864, Length=197, Percent_Identity=25.8883248730964, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1790739, Length=195, Percent_Identity=27.1794871794872, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786981, Length=183, Percent_Identity=27.3224043715847, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788897, Length=190, Percent_Identity=23.1578947368421, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789586, Length=198, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788540, Length=201, Percent_Identity=29.8507462686567, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788210, Length=189, Percent_Identity=31.7460317460317, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081782, Length=197, Percent_Identity=27.4111675126904, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786319, Length=164, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI145693107, Length=194, Percent_Identity=29.8969072164948, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790162, Length=176, Percent_Identity=29.5454545454545, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1789962, Length=173, Percent_Identity=28.9017341040462, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1787112, Length=210, Percent_Identity=28.0952380952381, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789991, Length=186, Percent_Identity=26.3440860215054, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787143, Length=194, Percent_Identity=28.3505154639175, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1790190, Length=190, Percent_Identity=24.7368421052632, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787548, Length=198, Percent_Identity=25.2525252525253, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787500, Length=199, Percent_Identity=25.6281407035176, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789593, Length=204, Percent_Identity=24.5098039215686, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787792, Length=201, Percent_Identity=24.3781094527363, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193208177, Length=193, Percent_Identity=31.6062176165803, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17569145, Length=195, Percent_Identity=31.7948717948718, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=218, Percent_Identity=26.605504587156, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17510237, Length=185, Percent_Identity=27.027027027027, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17569143, Length=195, Percent_Identity=31.7948717948718, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI115534520, Length=207, Percent_Identity=29.951690821256, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=193, Percent_Identity=28.4974093264249, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=194, Percent_Identity=27.319587628866, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=213, Percent_Identity=26.2910798122066, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=167, Percent_Identity=31.1377245508982, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71992290, Length=214, Percent_Identity=27.1028037383178, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17511077, Length=218, Percent_Identity=28.4403669724771, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=188, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=199, Percent_Identity=29.1457286432161, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=194, Percent_Identity=25.7731958762887, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=190, Percent_Identity=25.2631578947368, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=194, Percent_Identity=29.8969072164948, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=164, Percent_Identity=28.0487804878049, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=194, Percent_Identity=29.3814432989691, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=194, Percent_Identity=29.3814432989691, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=194, Percent_Identity=29.3814432989691, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17533971, Length=187, Percent_Identity=27.807486631016, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI25146777, Length=190, Percent_Identity=28.9473684210526, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322640, Length=192, Percent_Identity=32.8125, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6324498, Length=181, Percent_Identity=31.4917127071823, Blast_Score=69, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6323959, Length=191, Percent_Identity=27.2251308900524, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324985, Length=172, Percent_Identity=31.9767441860465, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321081, Length=219, Percent_Identity=24.2009132420091, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6319856, Length=178, Percent_Identity=29.2134831460674, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574533, Length=200, Percent_Identity=33, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI85724864, Length=201, Percent_Identity=30.3482587064677, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24580555, Length=201, Percent_Identity=30.3482587064677, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI85816269, Length=201, Percent_Identity=30.3482587064677, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24580553, Length=201, Percent_Identity=30.3482587064677, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17136662, Length=219, Percent_Identity=30.5936073059361, Blast_Score=77, Evalue=6e-15,
Organism=Drosophila melanogaster, GI85726357, Length=201, Percent_Identity=31.8407960199005, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24666092, Length=186, Percent_Identity=29.5698924731183, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161076682, Length=197, Percent_Identity=30.4568527918782, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161076684, Length=197, Percent_Identity=30.4568527918782, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24581617, Length=197, Percent_Identity=30.4568527918782, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24581615, Length=197, Percent_Identity=30.4568527918782, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24659289, Length=214, Percent_Identity=29.9065420560748, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357907, Length=199, Percent_Identity=30.6532663316583, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221512771, Length=165, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281363262, Length=192, Percent_Identity=31.7708333333333, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24653245, Length=192, Percent_Identity=31.7708333333333, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581409, Length=174, Percent_Identity=31.0344827586207, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI45552199, Length=174, Percent_Identity=31.0344827586207, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24581407, Length=174, Percent_Identity=31.0344827586207, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24643674, Length=184, Percent_Identity=24.4565217391304, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85724858, Length=212, Percent_Identity=29.2452830188679, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85724856, Length=212, Percent_Identity=29.2452830188679, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580547, Length=212, Percent_Identity=29.2452830188679, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580551, Length=212, Percent_Identity=29.2452830188679, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580549, Length=212, Percent_Identity=29.2452830188679, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580545, Length=212, Percent_Identity=29.2452830188679, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582014, Length=187, Percent_Identity=26.7379679144385, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24582012, Length=187, Percent_Identity=26.7379679144385, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 24908; Mature: 24777

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MGPSGSGKSTLLKLASTIEKPSAGSILINGIDVKKISEEERRKFRRKKFSFVFQDVKLIK
CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NLTIKDNIIYPMLLENNDKRYIEKEADKILKLLHIEDLQHRMVWELSGGQNQKGEIGRAL
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH
VQRKKIMFLDEPTGRLDFNSRKKIMEIFKSVNANEKCTIFLVTHDPFVASYAKRVFFIKD
HHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHEEEEEEC
GEIYSEIYKGENQENFYKDILNFNMFLGGRINEF
CHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GPSGSGKSTLLKLASTIEKPSAGSILINGIDVKKISEEERRKFRRKKFSFVFQDVKLIK
CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NLTIKDNIIYPMLLENNDKRYIEKEADKILKLLHIEDLQHRMVWELSGGQNQKGEIGRAL
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH
VQRKKIMFLDEPTGRLDFNSRKKIMEIFKSVNANEKCTIFLVTHDPFVASYAKRVFFIKD
HHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHEEEEEEC
GEIYSEIYKGENQENFYKDILNFNMFLGGRINEF
CHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7952181; 8867804; 9384377 [H]