| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755032
Identifier: 170755032
GI number: 170755032
Start: 1563309
End: 1564031
Strand: Direct
Name: 170755032
Synonym: CLD_3140
Alternate gene names: NA
Gene position: 1563309-1564031 (Clockwise)
Preceding gene: 170757552
Following gene: 170755836
Centisome position: 39.5
GC content: 25.31
Gene sequence:
>723_bases ATGAATTTTATACCCTTTGATAATTATAATATGTGTAAATTTTGTTATTTAAACAGATACAATCAAAATATGCATAATAA CTTTAGAAATTATAATAATTATTATAGAGAATGTAATATGGAGACTATCCCTTTAAATGAGCAAAATTTACGACCTAAAA ATTTTAGAATAACATATCCATTTGTAAAGGATATAGGCAACGAAAACATATCAAAATTTGTAAATAAATCTATAGCTAAT GAGGTAAGTAATTTATTTAAAGAACAAGCCCTGCCACCGGAGAAAATAAATATCCAGGAGGTTATAGGATTTTATGATGT TAAATTAAATAAAAGCTGTTTATTAAGTATATTATTTGGCATATACACTTATTATGCTAATGCAGCTCATGGTTCTACAA CCTATTCCTCTTTAAATATAGATATAGATACGGGTAAGATATATAAGTTAAGTGATCTTTTTACAAGTAGAATAAACTAT AAACCTATTTTAGAGCAAAAGGTAAAAGAATATATAAAAGTAAATAATGTTCCTCTATTAGAAGAATATAAAGGGTTACA TGAAGATCAACAATTTTATCTTACTCCAAATTCATTAGTATTATACTATCCAATATATGAGTATACTCCATATGCTTATG GTTTATTCCAAGTACCTATACCATTTAAAGATATACTAAATTTATTAGGACCAGCAAGTCCTATACAAAGATTGCTTAAA TGA
Upstream 100 bases:
>100_bases AAAGGAAGATTATAGAAGAAGTAAATGAATAAATGTGGTATCAATAGTGTATTGAATAACATATAATGGTAAAGAAATTA ATATTTAGGAAAGATATAGT
Downstream 100 bases:
>100_bases ACTTAAAAGATTATAAATCAATAATATTAAAAGGCTATAATTTAATTCATATCTACTTATAATATAGAAGAATAAAGATA AGTATGAGGCATAATAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MNFIPFDNYNMCKFCYLNRYNQNMHNNFRNYNNYYRECNMETIPLNEQNLRPKNFRITYPFVKDIGNENISKFVNKSIAN EVSNLFKEQALPPEKINIQEVIGFYDVKLNKSCLLSILFGIYTYYANAAHGSTTYSSLNIDIDTGKIYKLSDLFTSRINY KPILEQKVKEYIKVNNVPLLEEYKGLHEDQQFYLTPNSLVLYYPIYEYTPYAYGLFQVPIPFKDILNLLGPASPIQRLLK
Sequences:
>Translated_240_residues MNFIPFDNYNMCKFCYLNRYNQNMHNNFRNYNNYYRECNMETIPLNEQNLRPKNFRITYPFVKDIGNENISKFVNKSIAN EVSNLFKEQALPPEKINIQEVIGFYDVKLNKSCLLSILFGIYTYYANAAHGSTTYSSLNIDIDTGKIYKLSDLFTSRINY KPILEQKVKEYIKVNNVPLLEEYKGLHEDQQFYLTPNSLVLYYPIYEYTPYAYGLFQVPIPFKDILNLLGPASPIQRLLK >Mature_240_residues MNFIPFDNYNMCKFCYLNRYNQNMHNNFRNYNNYYRECNMETIPLNEQNLRPKNFRITYPFVKDIGNENISKFVNKSIAN EVSNLFKEQALPPEKINIQEVIGFYDVKLNKSCLLSILFGIYTYYANAAHGSTTYSSLNIDIDTGKIYKLSDLFTSRINY KPILEQKVKEYIKVNNVPLLEEYKGLHEDQQFYLTPNSLVLYYPIYEYTPYAYGLFQVPIPFKDILNLLGPASPIQRLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28334; Mature: 28334
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIPFDNYNMCKFCYLNRYNQNMHNNFRNYNNYYRECNMETIPLNEQNLRPKNFRITYP CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEH FVKDIGNENISKFVNKSIANEVSNLFKEQALPPEKINIQEVIGFYDVKLNKSCLLSILFG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEECHHHHHHHHHH IYTYYANAAHGSTTYSSLNIDIDTGKIYKLSDLFTSRINYKPILEQKVKEYIKVNNVPLL HHHHHHCCCCCCCEEEEEEEEECCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHH EEYKGLHEDQQFYLTPNSLVLYYPIYEYTPYAYGLFQVPIPFKDILNLLGPASPIQRLLK HHHCCCCCCCEEEECCCCEEEEEEHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHC >Mature Secondary Structure MNFIPFDNYNMCKFCYLNRYNQNMHNNFRNYNNYYRECNMETIPLNEQNLRPKNFRITYP CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEH FVKDIGNENISKFVNKSIANEVSNLFKEQALPPEKINIQEVIGFYDVKLNKSCLLSILFG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEECHHHHHHHHHH IYTYYANAAHGSTTYSSLNIDIDTGKIYKLSDLFTSRINYKPILEQKVKEYIKVNNVPLL HHHHHHCCCCCCCEEEEEEEEECCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHH EEYKGLHEDQQFYLTPNSLVLYYPIYEYTPYAYGLFQVPIPFKDILNLLGPASPIQRLLK HHHCCCCCCCEEEECCCCEEEEEEHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA