Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757230

Identifier: 170757230

GI number: 170757230

Start: 1054121

End: 1054501

Strand: Direct

Name: 170757230

Synonym: CLD_3623

Alternate gene names: NA

Gene position: 1054121-1054501 (Clockwise)

Preceding gene: 170756463

Following gene: 170754533

Centisome position: 26.63

GC content: 27.56

Gene sequence:

>381_bases
ATGGGATTTAAAATATTTACAATTGTTTCCAATTTAATTATTCCAGTTATTATGTTGTTTTTTGGAGTGAGATTTAGAAA
ACATGAGCCCAAAAATATTAATGGAATTTATGGTTATAGAACTTCAATGTCAATGAAAAATAAAGATACGTGGGAATTTG
CACATCAATATTGTGGAAGGCTATGGATAAAGTTGGGACTTATAATGTTAACTATATCTATTATTGTTAGCGTGTTAGTC
TTTGCGTATGTTGATGAAGCTCAAGGGATTATTGATGCAATATTAGTGACTATACAGACTATTGTTTTAATTGTATCTAT
TTTTCCTGTTGAAAAAGCATTAAAAAATAATTTTGATGGAAATGGGAATAGAAGAAATTAA

Upstream 100 bases:

>100_bases
AGCTAAGTTTTAAATGAATGTTTAAGATTTAATATAAGATGTACAATAGGAATAAACTGTGAGTTTAGAGTTGTTACTAT
TTTATAATATGGAGGAGTAC

Downstream 100 bases:

>100_bases
GCATCATTAATTCATAATAAAACAAGTTGCTTTTACTAACTAAATATATAGTGGGGGAGTAGTATGAGATATATAAGAGA
CGAAGAATTTATAAGAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MGFKIFTIVSNLIIPVIMLFFGVRFRKHEPKNINGIYGYRTSMSMKNKDTWEFAHQYCGRLWIKLGLIMLTISIIVSVLV
FAYVDEAQGIIDAILVTIQTIVLIVSIFPVEKALKNNFDGNGNRRN

Sequences:

>Translated_126_residues
MGFKIFTIVSNLIIPVIMLFFGVRFRKHEPKNINGIYGYRTSMSMKNKDTWEFAHQYCGRLWIKLGLIMLTISIIVSVLV
FAYVDEAQGIIDAILVTIQTIVLIVSIFPVEKALKNNFDGNGNRRN
>Mature_125_residues
GFKIFTIVSNLIIPVIMLFFGVRFRKHEPKNINGIYGYRTSMSMKNKDTWEFAHQYCGRLWIKLGLIMLTISIIVSVLVF
AYVDEAQGIIDAILVTIQTIVLIVSIFPVEKALKNNFDGNGNRRN

Specific function: Unknown

COG id: COG5658

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14413; Mature: 14282

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFKIFTIVSNLIIPVIMLFFGVRFRKHEPKNINGIYGYRTSMSMKNKDTWEFAHQYCGR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LWIKLGLIMLTISIIVSVLVFAYVDEAQGIIDAILVTIQTIVLIVSIFPVEKALKNNFDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NGNRRN
CCCCCC
>Mature Secondary Structure 
GFKIFTIVSNLIIPVIMLFFGVRFRKHEPKNINGIYGYRTSMSMKNKDTWEFAHQYCGR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LWIKLGLIMLTISIIVSVLVFAYVDEAQGIIDAILVTIQTIVLIVSIFPVEKALKNNFDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NGNRRN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA