| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756681
Identifier: 170756681
GI number: 170756681
Start: 2688854
End: 2689180
Strand: Reverse
Name: 170756681
Synonym: CLD_2067
Alternate gene names: NA
Gene position: 2689180-2688854 (Counterclockwise)
Preceding gene: 170757653
Following gene: 170756002
Centisome position: 67.94
GC content: 28.44
Gene sequence:
>327_bases ATGAATGGTAGAGATATTAAAGAAATAGGAGTATCGATTAAATTAGATAAAGAAAGACATCTTATATTTGATCTAAACGC TATGTGTGAATTAGAAGAAAAATTTGAAAGTATAGATGCTGCATTTGAAAAATTATCTGAGAATATGAAAATGAAAGATT TACGTTATACTTTATGGTTGGCATTAAAATATGAAGATGAGGAAATAACAGAAAAAGAAGCTGGAAGGCTGATGACAATA ACAGAGATAGATATAATTTTAAGCAAATTAGGAGAAGCTTTATTGGGATCGCTGCCTGAAAAGAATGAAGATGAAAAAAA CAGATAA
Upstream 100 bases:
>100_bases AGGAAGAATTCTTTAGTGTTGACTTCTTAAAAACAGGAAAGAAAGCAGTAGAAGCAGGGGCTTAATGCTCTTGCTCATTT GAATTTTAGGAGGTAATAAA
Downstream 100 bases:
>100_bases GCCACTCCAAGGATAAAACATTACCTTGGAGCTGGCTTTTTTATATTGGAAAGGTTCAACTAGGATTTTCTGAGAGAGAA TTTTGGAAACTTACATTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MNGRDIKEIGVSIKLDKERHLIFDLNAMCELEEKFESIDAAFEKLSENMKMKDLRYTLWLALKYEDEEITEKEAGRLMTI TEIDIILSKLGEALLGSLPEKNEDEKNR
Sequences:
>Translated_108_residues MNGRDIKEIGVSIKLDKERHLIFDLNAMCELEEKFESIDAAFEKLSENMKMKDLRYTLWLALKYEDEEITEKEAGRLMTI TEIDIILSKLGEALLGSLPEKNEDEKNR >Mature_108_residues MNGRDIKEIGVSIKLDKERHLIFDLNAMCELEEKFESIDAAFEKLSENMKMKDLRYTLWLALKYEDEEITEKEAGRLMTI TEIDIILSKLGEALLGSLPEKNEDEKNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12580; Mature: 12580
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRDIKEIGVSIKLDKERHLIFDLNAMCELEEKFESIDAAFEKLSENMKMKDLRYTLWL CCCCCCHHHCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEE ALKYEDEEITEKEAGRLMTITEIDIILSKLGEALLGSLPEKNEDEKNR EEEECCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNGRDIKEIGVSIKLDKERHLIFDLNAMCELEEKFESIDAAFEKLSENMKMKDLRYTLWL CCCCCCHHHCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEE ALKYEDEEITEKEAGRLMTITEIDIILSKLGEALLGSLPEKNEDEKNR EEEECCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA