| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170757653
Identifier: 170757653
GI number: 170757653
Start: 2689216
End: 2689797
Strand: Reverse
Name: 170757653
Synonym: CLD_2066
Alternate gene names: NA
Gene position: 2689797-2689216 (Counterclockwise)
Preceding gene: 170754992
Following gene: 170756681
Centisome position: 67.95
GC content: 36.43
Gene sequence:
>582_bases ATGGCTATTAAGGGATTACATGGATTCAGGTATTGCATTTTAGAAAACGACGATGCGGCAGGATTTGAATATGAAAAAGA AATTAAAAAATTGACAGGTGCGAGAAGTATAAAGGTTGATAATAAAGTAAATGATGCTAAGTTATATGGAGACGACCAAT TGCTTGAAACTGCAAGTGCTATCGGCTCTATAGATGTAGATATTGATGTTGCAGACTTGACATTAGAACAGCAAGCAGAG TTATTAGGATATAAATATGAAAATGGTGTCTTAATAGAGGATAAAAACTTTAATCCCCCATATATTGCATTTGGTTTCAT GGCGCCTAAATCTAGTGGCGGGAAAAGAATGGTGTGGCTGCTAAAAGGGAAAATGCAGCCTATGAGTGATGAGGCTAAAA CCCAAGACGATAAGGTAGAATTCCAAACACAAAAAGCGAAGTTTGTATTTATGCCTAGAGTGAATGATGGTAATCATAAA TTTAAAGCTGATACAAATACTACTGGAGCACCAACCGAGGAAGAATTCTTTAGTGTTGACTTCTTAAAAACAGGAAAGAA AGCAGTAGAAGCAGGGGCTTAA
Upstream 100 bases:
>100_bases AAAGACCAGGAGCACCAGATTTATATGAACCCGATACAGAAATATTCCATAAGTGTTTGAGGTTCTTTTATTATATAGAA AATAAGGAGGAGGAATAATA
Downstream 100 bases:
>100_bases TGCTCTTGCTCATTTGAATTTTAGGAGGTAATAAAATGAATGGTAGAGATATTAAAGAAATAGGAGTATCGATTAAATTA GATAAAGAAAGACATCTTAT
Product: phi13 family phage major tail protein
Products: NA
Alternate protein names: Phi13 Family Phage Tail Protein; Phage Protein; Phagelike Tail Protein; Phage Related Protein; Prophage
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAIKGLHGFRYCILENDDAAGFEYEKEIKKLTGARSIKVDNKVNDAKLYGDDQLLETASAIGSIDVDIDVADLTLEQQAE LLGYKYENGVLIEDKNFNPPYIAFGFMAPKSSGGKRMVWLLKGKMQPMSDEAKTQDDKVEFQTQKAKFVFMPRVNDGNHK FKADTNTTGAPTEEEFFSVDFLKTGKKAVEAGA
Sequences:
>Translated_193_residues MAIKGLHGFRYCILENDDAAGFEYEKEIKKLTGARSIKVDNKVNDAKLYGDDQLLETASAIGSIDVDIDVADLTLEQQAE LLGYKYENGVLIEDKNFNPPYIAFGFMAPKSSGGKRMVWLLKGKMQPMSDEAKTQDDKVEFQTQKAKFVFMPRVNDGNHK FKADTNTTGAPTEEEFFSVDFLKTGKKAVEAGA >Mature_192_residues AIKGLHGFRYCILENDDAAGFEYEKEIKKLTGARSIKVDNKVNDAKLYGDDQLLETASAIGSIDVDIDVADLTLEQQAEL LGYKYENGVLIEDKNFNPPYIAFGFMAPKSSGGKRMVWLLKGKMQPMSDEAKTQDDKVEFQTQKAKFVFMPRVNDGNHKF KADTNTTGAPTEEEFFSVDFLKTGKKAVEAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21464; Mature: 21333
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKGLHGFRYCILENDDAAGFEYEKEIKKLTGARSIKVDNKVNDAKLYGDDQLLETASA CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEECCHHHHHHHHH IGSIDVDIDVADLTLEQQAELLGYKYENGVLIEDKNFNPPYIAFGFMAPKSSGGKRMVWL HCCEEEEEEEECCCHHHHHHHHCEEECCCEEEECCCCCCCEEEEEEECCCCCCCCEEEEE LKGKMQPMSDEAKTQDDKVEFQTQKAKFVFMPRVNDGNHKFKADTNTTGAPTEEEFFSVD EECCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEECCCCCCCCCCHHHEEEH FLKTGKKAVEAGA HHHCCHHHHCCCC >Mature Secondary Structure AIKGLHGFRYCILENDDAAGFEYEKEIKKLTGARSIKVDNKVNDAKLYGDDQLLETASA CCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEECCHHHHHHHHH IGSIDVDIDVADLTLEQQAELLGYKYENGVLIEDKNFNPPYIAFGFMAPKSSGGKRMVWL HCCEEEEEEEECCCHHHHHHHHCEEECCCEEEECCCCCCCEEEEEEECCCCCCCCEEEEE LKGKMQPMSDEAKTQDDKVEFQTQKAKFVFMPRVNDGNHKFKADTNTTGAPTEEEFFSVD EECCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEECCCCCCCCCCHHHEEEH FLKTGKKAVEAGA HHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA