| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170755987
Identifier: 170755987
GI number: 170755987
Start: 159420
End: 159617
Strand: Direct
Name: 170755987
Synonym: CLD_0664
Alternate gene names: NA
Gene position: 159420-159617 (Clockwise)
Preceding gene: 170754962
Following gene: 170757021
Centisome position: 4.03
GC content: 23.23
Gene sequence:
>198_bases ATGGGAAGAATAATAGGCATATTTGATAAATATTTTTTAATTTTAATGTTAATTGAAGGGGGTATTACCATTTTTATGGA TGCCCCATCTTTTAAAGAATCGAATATGATGAAAAGCTATAATCAAGCTAGATGGATTGGTATTTTTATTATAACTATAA GTTTAATATTATATATTCTACAAAGAATATTGTTTTAA
Upstream 100 bases:
>100_bases AGTCATCGGATAAAGCTAAAGTTTTTACTTAAATGAATAAATTAAAGTTATAAAGGAAAAAATACTTTAGAGCTAATTTT TAATTTATTGGAGGAGCTTA
Downstream 100 bases:
>100_bases AATAGTATATTTCTTGAAATGTAGTATTTTTTTAGGTTAGTTCTAAAGGGAGTGTATACGATGAAGGAAGTAGTTAATGA TGAAATAAGTAAAAGTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MGRIIGIFDKYFLILMLIEGGITIFMDAPSFKESNMMKSYNQARWIGIFIITISLILYILQRILF
Sequences:
>Translated_65_residues MGRIIGIFDKYFLILMLIEGGITIFMDAPSFKESNMMKSYNQARWIGIFIITISLILYILQRILF >Mature_64_residues GRIIGIFDKYFLILMLIEGGITIFMDAPSFKESNMMKSYNQARWIGIFIITISLILYILQRILF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7623; Mature: 7492
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRIIGIFDKYFLILMLIEGGITIFMDAPSFKESNMMKSYNQARWIGIFIITISLILYIL CCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHH QRILF HHHCC >Mature Secondary Structure GRIIGIFDKYFLILMLIEGGITIFMDAPSFKESNMMKSYNQARWIGIFIITISLILYIL CCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHH QRILF HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA