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The map label for this gene is gerKA [H]

Identifier: 170757021

GI number: 170757021

Start: 159678

End: 161138

Strand: Direct

Name: gerKA [H]

Synonym: CLD_0663

Alternate gene names: 170757021

Gene position: 159678-161138 (Clockwise)

Preceding gene: 170755987

Following gene: 170754373

Centisome position: 4.03

GC content: 30.12

Gene sequence:

>1461_bases
ATGAAGGAAGTAGTTAATGATGAAATAAGTAAAAGTATAGATAAAAATATAAAATATATAAAAGAATTACTGGAAGGTAG
TTCTGATATGGTTTTCAGAGAATTTTTAATAGGAAATAAGAAAGCTTTTATGGTATACATAGATGGCATGGCAGATAAAA
TTTTATTAAATGATTATGTGCTAGAATCACTTATGCTAGAGGCCGATAAGGTCAGTAGTATAGATAACATCAAAAACAAA
ATTTTAACAGTAACGGATGTATCAGAGCAAGAAAAATTAAGTAAAGCTATAGACTTGATATTATCAGGAGATACTTTACT
ATTAATAGATGGTATAGATAATGCTTATGTAATAGCTACAAGACTCTGGCCTGTTAGAGGGATTGGGGAACCACAGTCAG
AAACAACAATAAAAGGAAGCAGAGATGGATTTACAGAAACTATAAGATTTAATACTGCGTTGGTTAGAAGAAGAATAAAA
GATACTAGATTGAAGATAGAACCTAAAAAATTAGGAGTAAGGTCTAAAACAGATGTATTTATTATGTACATAGAGGATAT
TGTAAATCAGGACGTTTTAAACAATTTATATAATAAATTAGAAAAAATAAAGATTGATGCTATATTAGGAAGTGGATATG
TAGAGCATTTTATAGAAGATAATAAATGGTCCCTTTTCCCAACTACTAAAAGTACAGAAAGACCAGATGTAGTAGCTTCA
GCTTTATATGAAGGGAAAGTAGCTATTTTAGTTGATAACTCACCCTTTGCCATTATAGTTCCTACTACATTACCAAGTTT
GTTTCAGTCTCCAGATGATTACTATCAAAGATGGATACATTCATCAATAATAAGAATAATAAGATTATTTTCAATAATTA
TTAGTATTATATTACCGGCTATGTATGTAGCTGTAACTTCTTATCATAGTGCGATAATACCAACTAAATTAGCTTATTTT
ATTGCTTCATCTAGAGAAGGGGTACCTTTTCCTGCTTACATGGAAGCTATAATAATGGAGCTTAGCTTAGAATTACTAAT
GGAATCTATAGTTAGATTACCGAAACCCGTAGGGGCCACCATAGGCATTGTGGGTGGTCTAATAATAGGTCAGGCAGCGG
TATCAGCAGGTATTGTAAGTCCAATAATGATAATAATTGTTTCTATAACCACTATAACAAGTTTTACAGCACCAAGTTAT
GATGTAAGTTCTTCCTTTAGAATAATTAGATTCTTATTAATTATAGCAGCATCATTTTTAGGGTTATATGGAGTAGTTTT
AGGATTGATAGTACTGTTAGTACATTTAGTAAGATTAAAAAGTTTTGGTATACCTTATTTATCACCTATGGTTAATCCAA
GTATTAGTGATTTCAAAGATATGTATATAAGAGCGCCTATAAGATTTTTTAAGAAAAGACCAGATTACATGAAAACTAGA
GATAAGATAAGACAAAGATAA

Upstream 100 bases:

>100_bases
AAGTTTAATATTATATATTCTACAAAGAATATTGTTTTAAAATAGTATATTTCTTGAAATGTAGTATTTTTTTAGGTTAG
TTCTAAAGGGAGTGTATACG

Downstream 100 bases:

>100_bases
AATAGATTTGGAGGAATTAATGGTGAGGGATGAGAACTTTGTAACATCTTATAGTTTGTTTGCTACTATTGTAACAAGTG
TTATTGGAGTAAGTGTATTT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MKEVVNDEISKSIDKNIKYIKELLEGSSDMVFREFLIGNKKAFMVYIDGMADKILLNDYVLESLMLEADKVSSIDNIKNK
ILTVTDVSEQEKLSKAIDLILSGDTLLLIDGIDNAYVIATRLWPVRGIGEPQSETTIKGSRDGFTETIRFNTALVRRRIK
DTRLKIEPKKLGVRSKTDVFIMYIEDIVNQDVLNNLYNKLEKIKIDAILGSGYVEHFIEDNKWSLFPTTKSTERPDVVAS
ALYEGKVAILVDNSPFAIIVPTTLPSLFQSPDDYYQRWIHSSIIRIIRLFSIIISIILPAMYVAVTSYHSAIIPTKLAYF
IASSREGVPFPAYMEAIIMELSLELLMESIVRLPKPVGATIGIVGGLIIGQAAVSAGIVSPIMIIIVSITTITSFTAPSY
DVSSSFRIIRFLLIIAASFLGLYGVVLGLIVLLVHLVRLKSFGIPYLSPMVNPSISDFKDMYIRAPIRFFKKRPDYMKTR
DKIRQR

Sequences:

>Translated_486_residues
MKEVVNDEISKSIDKNIKYIKELLEGSSDMVFREFLIGNKKAFMVYIDGMADKILLNDYVLESLMLEADKVSSIDNIKNK
ILTVTDVSEQEKLSKAIDLILSGDTLLLIDGIDNAYVIATRLWPVRGIGEPQSETTIKGSRDGFTETIRFNTALVRRRIK
DTRLKIEPKKLGVRSKTDVFIMYIEDIVNQDVLNNLYNKLEKIKIDAILGSGYVEHFIEDNKWSLFPTTKSTERPDVVAS
ALYEGKVAILVDNSPFAIIVPTTLPSLFQSPDDYYQRWIHSSIIRIIRLFSIIISIILPAMYVAVTSYHSAIIPTKLAYF
IASSREGVPFPAYMEAIIMELSLELLMESIVRLPKPVGATIGIVGGLIIGQAAVSAGIVSPIMIIIVSITTITSFTAPSY
DVSSSFRIIRFLLIIAASFLGLYGVVLGLIVLLVHLVRLKSFGIPYLSPMVNPSISDFKDMYIRAPIRFFKKRPDYMKTR
DKIRQR
>Mature_486_residues
MKEVVNDEISKSIDKNIKYIKELLEGSSDMVFREFLIGNKKAFMVYIDGMADKILLNDYVLESLMLEADKVSSIDNIKNK
ILTVTDVSEQEKLSKAIDLILSGDTLLLIDGIDNAYVIATRLWPVRGIGEPQSETTIKGSRDGFTETIRFNTALVRRRIK
DTRLKIEPKKLGVRSKTDVFIMYIEDIVNQDVLNNLYNKLEKIKIDAILGSGYVEHFIEDNKWSLFPTTKSTERPDVVAS
ALYEGKVAILVDNSPFAIIVPTTLPSLFQSPDDYYQRWIHSSIIRIIRLFSIIISIILPAMYVAVTSYHSAIIPTKLAYF
IASSREGVPFPAYMEAIIMELSLELLMESIVRLPKPVGATIGIVGGLIIGQAAVSAGIVSPIMIIIVSITTITSFTAPSY
DVSSSFRIIRFLLIIAASFLGLYGVVLGLIVLLVHLVRLKSFGIPYLSPMVNPSISDFKDMYIRAPIRFFKKRPDYMKTR
DKIRQR

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 54610; Mature: 54610

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVVNDEISKSIDKNIKYIKELLEGSSDMVFREFLIGNKKAFMVYIDGMADKILLNDYV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHH
LESLMLEADKVSSIDNIKNKILTVTDVSEQEKLSKAIDLILSGDTLLLIDGIDNAYVIAT
HHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEE
RLWPVRGIGEPQSETTIKGSRDGFTETIRFNTALVRRRIKDTRLKIEPKKLGVRSKTDVF
ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECHHHCCCCCCCCEE
IMYIEDIVNQDVLNNLYNKLEKIKIDAILGSGYVEHFIEDNKWSLFPTTKSTERPDVVAS
EEEHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCHHHHH
ALYEGKVAILVDNSPFAIIVPTTLPSLFQSPDDYYQRWIHSSIIRIIRLFSIIISIILPA
HHHCCEEEEEECCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MYVAVTSYHSAIIPTKLAYFIASSREGVPFPAYMEAIIMELSLELLMESIVRLPKPVGAT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
IGIVGGLIIGQAAVSAGIVSPIMIIIVSITTITSFTAPSYDVSSSFRIIRFLLIIAASFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
GLYGVVLGLIVLLVHLVRLKSFGIPYLSPMVNPSISDFKDMYIRAPIRFFKKRPDYMKTR
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
DKIRQR
HHHHCC
>Mature Secondary Structure
MKEVVNDEISKSIDKNIKYIKELLEGSSDMVFREFLIGNKKAFMVYIDGMADKILLNDYV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHH
LESLMLEADKVSSIDNIKNKILTVTDVSEQEKLSKAIDLILSGDTLLLIDGIDNAYVIAT
HHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEE
RLWPVRGIGEPQSETTIKGSRDGFTETIRFNTALVRRRIKDTRLKIEPKKLGVRSKTDVF
ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECHHHCCCCCCCCEE
IMYIEDIVNQDVLNNLYNKLEKIKIDAILGSGYVEHFIEDNKWSLFPTTKSTERPDVVAS
EEEHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCHHHHH
ALYEGKVAILVDNSPFAIIVPTTLPSLFQSPDDYYQRWIHSSIIRIIRLFSIIISIILPA
HHHCCEEEEEECCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MYVAVTSYHSAIIPTKLAYFIASSREGVPFPAYMEAIIMELSLELLMESIVRLPKPVGAT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
IGIVGGLIIGQAAVSAGIVSPIMIIIVSITTITSFTAPSYDVSSSFRIIRFLLIIAASFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
GLYGVVLGLIVLLVHLVRLKSFGIPYLSPMVNPSISDFKDMYIRAPIRFFKKRPDYMKTR
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
DKIRQR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]