| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755918
Identifier: 170755918
GI number: 170755918
Start: 29639
End: 30451
Strand: Direct
Name: 170755918
Synonym: CLD_0795
Alternate gene names: NA
Gene position: 29639-30451 (Clockwise)
Preceding gene: 170756206
Following gene: 170754513
Centisome position: 0.75
GC content: 24.23
Gene sequence:
>813_bases ATGGTTAATTCATTTTTTAAAATTGAACTTAAAAGAGCTTTTTTTAGATGGAAAACATTCATTGCATTTATAATTTTTAT GGCTGTTTTTATACATATATCTTATTTAGATAAATTAGATATCCCTAATACTCCTACGTATCTTAAATATTTCTTCTTAG AGAATCATAATGGTTTTATTAGTTATTTAAAAGCTATGGGATTTGTAAATAGCTATATGGCAATTGTATTTCCTATAATT ATATTATTAGTAGTTGGAGATTCATTAATTGAAGATGTAAAAACAGGATTTTTACAATTCTATTTAACTAGAACAGATTG GAAGAACTATATTCGTTCAAAGACTATTGCAGTATCATTAGTCTCATTTATGGTTACATTTATATTTCAGGTATGTGCTT TTATTTATTCTATGATTACACATCCATTTTATATACCTAGAAATATTGATGCAGCACCTAGCTATGCTAGAGGTTTGTAT ATGTTGAATCCATATTTATATATTTTGCTAATTTGTATAATATTTTCTTTAATATCAATAGTTATAGCACTATTCGCAAT TGCACTATCTAATAGGTTAAAAAATTCTTCACAAGCTATTTTAATCCCCTGGATTCTATATTTAATATTAGGTATAGGAT TAAATTGTATAGATTCAATATATTCTTTTAGTCCTGTATTTATGTGCGGACCGTTTATATTTGAACGTTTTTATTCTGGA TGGGAAATAATCTTATATTGGAGTGTAATTTTATTTTTAAGTATATATTTAGGATTTAAATTGTTTTCCAAAAATTTTGT TTTTAATAAATAG
Upstream 100 bases:
>100_bases AAGTGTATAATTCTAAATATAGTATTAATAATATTTAACACTATGGTCGGTAGTATTTTTATTATAAAAAAAGATATATT ATAAATTTTTAGGAGGTACT
Downstream 100 bases:
>100_bases AATTTTGAGAAAATATTATAATGTAACACAATGGATAAGATATATCATTCAATATATTATAATAAATTGATATAAATATA ACTGATGAGATTAAAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MVNSFFKIELKRAFFRWKTFIAFIIFMAVFIHISYLDKLDIPNTPTYLKYFFLENHNGFISYLKAMGFVNSYMAIVFPII ILLVVGDSLIEDVKTGFLQFYLTRTDWKNYIRSKTIAVSLVSFMVTFIFQVCAFIYSMITHPFYIPRNIDAAPSYARGLY MLNPYLYILLICIIFSLISIVIALFAIALSNRLKNSSQAILIPWILYLILGIGLNCIDSIYSFSPVFMCGPFIFERFYSG WEIILYWSVILFLSIYLGFKLFSKNFVFNK
Sequences:
>Translated_270_residues MVNSFFKIELKRAFFRWKTFIAFIIFMAVFIHISYLDKLDIPNTPTYLKYFFLENHNGFISYLKAMGFVNSYMAIVFPII ILLVVGDSLIEDVKTGFLQFYLTRTDWKNYIRSKTIAVSLVSFMVTFIFQVCAFIYSMITHPFYIPRNIDAAPSYARGLY MLNPYLYILLICIIFSLISIVIALFAIALSNRLKNSSQAILIPWILYLILGIGLNCIDSIYSFSPVFMCGPFIFERFYSG WEIILYWSVILFLSIYLGFKLFSKNFVFNK >Mature_270_residues MVNSFFKIELKRAFFRWKTFIAFIIFMAVFIHISYLDKLDIPNTPTYLKYFFLENHNGFISYLKAMGFVNSYMAIVFPII ILLVVGDSLIEDVKTGFLQFYLTRTDWKNYIRSKTIAVSLVSFMVTFIFQVCAFIYSMITHPFYIPRNIDAAPSYARGLY MLNPYLYILLICIIFSLISIVIALFAIALSNRLKNSSQAILIPWILYLILGIGLNCIDSIYSFSPVFMCGPFIFERFYSG WEIILYWSVILFLSIYLGFKLFSKNFVFNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31588; Mature: 31588
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNSFFKIELKRAFFRWKTFIAFIIFMAVFIHISYLDKLDIPNTPTYLKYFFLENHNGFI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCHHH SYLKAMGFVNSYMAIVFPIIILLVVGDSLIEDVKTGFLQFYLTRTDWKNYIRSKTIAVSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSFMVTFIFQVCAFIYSMITHPFYIPRNIDAAPSYARGLYMLNPYLYILLICIIFSLISI HHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VIALFAIALSNRLKNSSQAILIPWILYLILGIGLNCIDSIYSFSPVFMCGPFIFERFYSG HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCC WEIILYWSVILFLSIYLGFKLFSKNFVFNK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVNSFFKIELKRAFFRWKTFIAFIIFMAVFIHISYLDKLDIPNTPTYLKYFFLENHNGFI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCHHH SYLKAMGFVNSYMAIVFPIIILLVVGDSLIEDVKTGFLQFYLTRTDWKNYIRSKTIAVSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSFMVTFIFQVCAFIYSMITHPFYIPRNIDAAPSYARGLYMLNPYLYILLICIIFSLISI HHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VIALFAIALSNRLKNSSQAILIPWILYLILGIGLNCIDSIYSFSPVFMCGPFIFERFYSG HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCC WEIILYWSVILFLSIYLGFKLFSKNFVFNK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA