| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170756206
Identifier: 170756206
GI number: 170756206
Start: 28819
End: 29622
Strand: Direct
Name: 170756206
Synonym: CLD_0796
Alternate gene names: NA
Gene position: 28819-29622 (Clockwise)
Preceding gene: 170757006
Following gene: 170755918
Centisome position: 0.73
GC content: 19.65
Gene sequence:
>804_bases ATGAAGAACTTAATATTAAATCAAATATATTCTACTAAGAAAAATGTTGTAACAAGCATACTGCTTATTTTATTTTTTAA TATTTGTCAACTTATTTCTATATTAAATGATGGCAAACTAGATAAGCTAGAAGTTAGACCATTAGATTTTTTTATTAAAA TCTATGGTGGAGTACATTCTAAATTTTTTATATTCCAATATATTCAGTGGATTGTTGTTATATGTACTTTGCTATTAATA ATAGAAAATATTATTAATTCTTATAAGGGATTGGATTTAATGATAATAAATAGGTCAGGATTTAGATTAAAATGGTGGAG TTCAAAAATAATATCATTATTTTTATTAAATATAATTTATATAATAGCAATTATTGTTATATATAAGATCCTATCTATAA TATTTTTATGTCCATCTAATTATAAAATATGGAGTACATATTCAAAAATTTATTATATTGATCTATATAACAGTACAATA AATCCTGATAAAGTATTATTTATGTGCTTATGTATAATGTTAACTGGATTTATTGCTATTTCTACATTTTTTCAGACTAT AAATGAAATTACAAATAATAATATAAAAATTTTCATAGTATTTATAATTATAATGGTTATTAATGGAATATTACATATGA ATAACTTAATACCTAGAGTACTGTCACCATTAAATTATCCATCTATTTTAGATATAACACCTAATGTTGGGAATTATATT AAGTGTATAATTCTAAATATAGTATTAATAATATTTAACACTATGGTCGGTAGTATTTTTATTATAAAAAAAGATATATT ATAA
Upstream 100 bases:
>100_bases CTATTAAATTCTATATAGCAATATCATTAATAGCTTTTTTAGTAGGTATGTTATGTATTAATAAGATTAATTTTAACAAG AAAATGTGAGGATTAAGATA
Downstream 100 bases:
>100_bases ATTTTTAGGAGGTACTATGGTTAATTCATTTTTTAAAATTGAACTTAAAAGAGCTTTTTTTAGATGGAAAACATTCATTG CATTTATAATTTTTATGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKNLILNQIYSTKKNVVTSILLILFFNICQLISILNDGKLDKLEVRPLDFFIKIYGGVHSKFFIFQYIQWIVVICTLLLI IENIINSYKGLDLMIINRSGFRLKWWSSKIISLFLLNIIYIIAIIVIYKILSIIFLCPSNYKIWSTYSKIYYIDLYNSTI NPDKVLFMCLCIMLTGFIAISTFFQTINEITNNNIKIFIVFIIIMVINGILHMNNLIPRVLSPLNYPSILDITPNVGNYI KCIILNIVLIIFNTMVGSIFIIKKDIL
Sequences:
>Translated_267_residues MKNLILNQIYSTKKNVVTSILLILFFNICQLISILNDGKLDKLEVRPLDFFIKIYGGVHSKFFIFQYIQWIVVICTLLLI IENIINSYKGLDLMIINRSGFRLKWWSSKIISLFLLNIIYIIAIIVIYKILSIIFLCPSNYKIWSTYSKIYYIDLYNSTI NPDKVLFMCLCIMLTGFIAISTFFQTINEITNNNIKIFIVFIIIMVINGILHMNNLIPRVLSPLNYPSILDITPNVGNYI KCIILNIVLIIFNTMVGSIFIIKKDIL >Mature_267_residues MKNLILNQIYSTKKNVVTSILLILFFNICQLISILNDGKLDKLEVRPLDFFIKIYGGVHSKFFIFQYIQWIVVICTLLLI IENIINSYKGLDLMIINRSGFRLKWWSSKIISLFLLNIIYIIAIIVIYKILSIIFLCPSNYKIWSTYSKIYYIDLYNSTI NPDKVLFMCLCIMLTGFIAISTFFQTINEITNNNIKIFIVFIIIMVINGILHMNNLIPRVLSPLNYPSILDITPNVGNYI KCIILNIVLIIFNTMVGSIFIIKKDIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31004; Mature: 31004
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLILNQIYSTKKNVVTSILLILFFNICQLISILNDGKLDKLEVRPLDFFIKIYGGVHS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCCH KFFIFQYIQWIVVICTLLLIIENIINSYKGLDLMIINRSGFRLKWWSSKIISLFLLNIIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHH IIAIIVIYKILSIIFLCPSNYKIWSTYSKIYYIDLYNSTINPDKVLFMCLCIMLTGFIAI HHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH STFFQTINEITNNNIKIFIVFIIIMVINGILHMNNLIPRVLSPLNYPSILDITPNVGNYI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHH KCIILNIVLIIFNTMVGSIFIIKKDIL HHHHHHHHHHHHHHHHHHEEEEEECCC >Mature Secondary Structure MKNLILNQIYSTKKNVVTSILLILFFNICQLISILNDGKLDKLEVRPLDFFIKIYGGVHS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCCH KFFIFQYIQWIVVICTLLLIIENIINSYKGLDLMIINRSGFRLKWWSSKIISLFLLNIIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHH IIAIIVIYKILSIIFLCPSNYKIWSTYSKIYYIDLYNSTINPDKVLFMCLCIMLTGFIAI HHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH STFFQTINEITNNNIKIFIVFIIIMVINGILHMNNLIPRVLSPLNYPSILDITPNVGNYI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHH KCIILNIVLIIFNTMVGSIFIIKKDIL HHHHHHHHHHHHHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA