| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is msrA
Identifier: 170755766
GI number: 170755766
Start: 2054946
End: 2055419
Strand: Reverse
Name: msrA
Synonym: CLD_2703
Alternate gene names: 170755766
Gene position: 2055419-2054946 (Counterclockwise)
Preceding gene: 170754560
Following gene: 170754979
Centisome position: 51.93
GC content: 31.22
Gene sequence:
>474_bases ATGAAAGAAATAGTTTTAGCTGGAGGTTGTTTTTGGGGAGTAGAAGAATATATGTCGAGAATTAAAGGCATAGTGGAAAC AAAAGTAGGTTATGCTAATGGAATAAAAGAAAACCCTAGTTATGAAGAGGTATGCAGTGGAACCACAGGTCATGCAGAAG CTTGTTATATAAAATATGATGAAAGTATTATATCCTTAGAAGAACTGTTAAATAAATTTTGGAGCATAATAGATCCAACA GTACTAAATAAACAGGGTAACGATAGAGGAACCCAGTATAGAACAGGTATATTTTACTTAGATCAAAAAGATTTAAATGT AATTATAAAGAGTAAATCTCAGGAGCAGAAAAATTATAGAAAGCCTATAGTTACTGAAGTAGAGCCCCTAAAGTGTTTTT ATGAGGCTGAAGAGTATCACCAAAAATATTTAAAGAAAAATCCAGGAGGTTATTGTCATATACATTTAGATTAA
Upstream 100 bases:
>100_bases AAAGTGTTTCTAAACTTAATTATGAAGTAATATATAAAGTTTAAGTAATTGCTAGTTGAAGTTATTAAGAGTTCTTAAAG AAATTATGGAGGTGTTAATT
Downstream 100 bases:
>100_bases TTTTTATTATATGTTTTATAGGGTATGTAGGTAGATTTGTGTAAAAACAAATTTACCTACATACCCTATAAAGAGAATGT AAATAATTTTATATATTTGT
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKEIVLAGGCFWGVEEYMSRIKGIVETKVGYANGIKENPSYEEVCSGTTGHAEACYIKYDESIISLEELLNKFWSIIDPT VLNKQGNDRGTQYRTGIFYLDQKDLNVIIKSKSQEQKNYRKPIVTEVEPLKCFYEAEEYHQKYLKKNPGGYCHIHLD
Sequences:
>Translated_157_residues MKEIVLAGGCFWGVEEYMSRIKGIVETKVGYANGIKENPSYEEVCSGTTGHAEACYIKYDESIISLEELLNKFWSIIDPT VLNKQGNDRGTQYRTGIFYLDQKDLNVIIKSKSQEQKNYRKPIVTEVEPLKCFYEAEEYHQKYLKKNPGGYCHIHLD >Mature_157_residues MKEIVLAGGCFWGVEEYMSRIKGIVETKVGYANGIKENPSYEEVCSGTTGHAEACYIKYDESIISLEELLNKFWSIIDPT VLNKQGNDRGTQYRTGIFYLDQKDLNVIIKSKSQEQKNYRKPIVTEVEPLKCFYEAEEYHQKYLKKNPGGYCHIHLD
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=154, Percent_Identity=45.4545454545455, Blast_Score=142, Evalue=2e-34, Organism=Homo sapiens, GI208609995, Length=154, Percent_Identity=45.4545454545455, Blast_Score=141, Evalue=3e-34, Organism=Homo sapiens, GI208609993, Length=138, Percent_Identity=39.8550724637681, Blast_Score=99, Evalue=2e-21, Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=44.4444444444444, Blast_Score=131, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17533973, Length=134, Percent_Identity=35.8208955223881, Blast_Score=82, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6320881, Length=163, Percent_Identity=47.239263803681, Blast_Score=137, Evalue=8e-34, Organism=Drosophila melanogaster, GI24664627, Length=142, Percent_Identity=36.6197183098592, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI45553131, Length=137, Percent_Identity=37.2262773722628, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI24664631, Length=142, Percent_Identity=36.6197183098592, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 18102; Mature: 18102
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIVLAGGCFWGVEEYMSRIKGIVETKVGYANGIKENPSYEEVCSGTTGHAEACYIKYD CCCEEEECCHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEC ESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDQKDLNVIIKSKSQEQKNYR CHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCHHHHHHC KPIVTEVEPLKCFYEAEEYHQKYLKKNPGGYCHIHLD CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure MKEIVLAGGCFWGVEEYMSRIKGIVETKVGYANGIKENPSYEEVCSGTTGHAEACYIKYD CCCEEEECCHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEC ESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDQKDLNVIIKSKSQEQKNYR CHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCHHHHHHC KPIVTEVEPLKCFYEAEEYHQKYLKKNPGGYCHIHLD CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA