| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is baeS [H]
Identifier: 170754560
GI number: 170754560
Start: 2056760
End: 2058220
Strand: Reverse
Name: baeS [H]
Synonym: CLD_2701
Alternate gene names: 170754560
Gene position: 2058220-2056760 (Counterclockwise)
Preceding gene: 170754678
Following gene: 170755766
Centisome position: 52.0
GC content: 26.15
Gene sequence:
>1461_bases ATGAAAAAAGCATCCTTAAAAACACAAACTATAAGTACTTTTCTATTAATTATATTTTTAAGTATGGTATGTACAATAAC TACTATAGGAGTTTATTTTTATATTATGTATTTTGGAAAAGATCCTATGCTAAGGCCAAATAACTATTATCAGAAACAGT CAGATAAAATTCAACAGTTTATCGTTAGTAAGGGAGAAGATATATTAGAGGATAAAAATAGATTAGAACTTGAAAATTTA GTTCCCCAAAAAGGTATAGGATATCAAATTACAGATCTAGAGGGTAAAATTATATATGGAAATGAAAAAGAGAGAATAAT AAAGAATAAAAAACAGTTGATAGAGTCAATAAATAAAACAGATATTGATAATCTTGATAGAGCTAGCGTTTTTGGATCAA AGGTTAAAAGGTATATACCTATAGTGGATAGTGATTCCAATGTGAAAGGCGCCGCTATAATTAAATACAATATTGATACA AGTGTTAAAGAAGATAAAAATGAAAAAATAGTTCATGTATTTCAAGTATTCTTACCATTCTCTCCTTTTGTATATATAAT TATTTTTACAATTATTTTCACAAGAAAGCTAATTAAAAGTATTCAGCATCCAATAAATGCAATAATAGATGCTTCAAATA AAATAAAGGAGAAGGATTTAAATTTTGAAATAAATTATAAAAGCAATAATGAGCTAGGAAAATTAGTTTCTTCTTTTGAA GAGATGAAAAATGCTTTAAAAGAATCACTAAATAAACAATGGATTATGGAGGAAGACAGAAAAGAAATAATAAAAGCCAT AGCTCATGATTTGAAAACTCCTATTACTGTTATTCAAGGACATGTAGAGGTACTTATGGAAGGGGGAGTTAAAGATCCTA TTAGAGTAGAAAAATATTTAAATATTATAAAAGCTAATACAGAGAGAATGGGAAGGCTTATTTCAGACATGAATCTCACA TCAGAAATAGAGAATAAAAATTTTGATTTAGTTCCTGTAAAGGTAGATATAATTGAATTCTTAGAAAAAAAACAACAGGA TTATAAAGTGCTATGTAAGGACAAAAATATAGAATTTAAATTATTTTTAGAAAAGAATTTTAATTTAAACAAGGAATTTT CTATAGATGCTGAAAGACTAGAGCAAATACTAGATAATATAATATCTAATGCCATAAGGTATACACCTGATGGAAAATCT ATAATTACTAAAGTAAAAATACATAATAATATTATAAAATTTATTGTGGAAGACGAAGGAACAGGTTTTAGTGATAAGGA ATTATGCTATATTTTTGAAAAATTCTATAGAGGTGATAGTTCAAGATCTAAAGAGAAAGGTCACTCTGGATTGGGAATGT ACATTGTAAGAATTTTAGTAGAAAAGCATAATGGTTGGATTGTAGCAGAAAATAAAGAAAAAGGCGGAGCTAGAATAGAA TTTGTTATAAAAGAAATATAA
Upstream 100 bases:
>100_bases ATATAAAAAAGATAAGAGCAAAGTTCATAAAAAGGAATGCATCTCTTAATCATATAGCTACGGTATGGGGAGTAGGTTAT AGATGGGAGAAAAATAAAAT
Downstream 100 bases:
>100_bases AGATGTTGAATATTTTGGTATAGAACCAGGTCTTTGAGTTAACTTGTACAAGCTGCAGATGATTTAAAAGAATTATATTA GAAAATATTTAAAGGCTGTA
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MKKASLKTQTISTFLLIIFLSMVCTITTIGVYFYIMYFGKDPMLRPNNYYQKQSDKIQQFIVSKGEDILEDKNRLELENL VPQKGIGYQITDLEGKIIYGNEKERIIKNKKQLIESINKTDIDNLDRASVFGSKVKRYIPIVDSDSNVKGAAIIKYNIDT SVKEDKNEKIVHVFQVFLPFSPFVYIIIFTIIFTRKLIKSIQHPINAIIDASNKIKEKDLNFEINYKSNNELGKLVSSFE EMKNALKESLNKQWIMEEDRKEIIKAIAHDLKTPITVIQGHVEVLMEGGVKDPIRVEKYLNIIKANTERMGRLISDMNLT SEIENKNFDLVPVKVDIIEFLEKKQQDYKVLCKDKNIEFKLFLEKNFNLNKEFSIDAERLEQILDNIISNAIRYTPDGKS IITKVKIHNNIIKFIVEDEGTGFSDKELCYIFEKFYRGDSSRSKEKGHSGLGMYIVRILVEKHNGWIVAENKEKGGARIE FVIKEI
Sequences:
>Translated_486_residues MKKASLKTQTISTFLLIIFLSMVCTITTIGVYFYIMYFGKDPMLRPNNYYQKQSDKIQQFIVSKGEDILEDKNRLELENL VPQKGIGYQITDLEGKIIYGNEKERIIKNKKQLIESINKTDIDNLDRASVFGSKVKRYIPIVDSDSNVKGAAIIKYNIDT SVKEDKNEKIVHVFQVFLPFSPFVYIIIFTIIFTRKLIKSIQHPINAIIDASNKIKEKDLNFEINYKSNNELGKLVSSFE EMKNALKESLNKQWIMEEDRKEIIKAIAHDLKTPITVIQGHVEVLMEGGVKDPIRVEKYLNIIKANTERMGRLISDMNLT SEIENKNFDLVPVKVDIIEFLEKKQQDYKVLCKDKNIEFKLFLEKNFNLNKEFSIDAERLEQILDNIISNAIRYTPDGKS IITKVKIHNNIIKFIVEDEGTGFSDKELCYIFEKFYRGDSSRSKEKGHSGLGMYIVRILVEKHNGWIVAENKEKGGARIE FVIKEI >Mature_486_residues MKKASLKTQTISTFLLIIFLSMVCTITTIGVYFYIMYFGKDPMLRPNNYYQKQSDKIQQFIVSKGEDILEDKNRLELENL VPQKGIGYQITDLEGKIIYGNEKERIIKNKKQLIESINKTDIDNLDRASVFGSKVKRYIPIVDSDSNVKGAAIIKYNIDT SVKEDKNEKIVHVFQVFLPFSPFVYIIIFTIIFTRKLIKSIQHPINAIIDASNKIKEKDLNFEINYKSNNELGKLVSSFE EMKNALKESLNKQWIMEEDRKEIIKAIAHDLKTPITVIQGHVEVLMEGGVKDPIRVEKYLNIIKANTERMGRLISDMNLT SEIENKNFDLVPVKVDIIEFLEKKQQDYKVLCKDKNIEFKLFLEKNFNLNKEFSIDAERLEQILDNIISNAIRYTPDGKS IITKVKIHNNIIKFIVEDEGTGFSDKELCYIFEKFYRGDSSRSKEKGHSGLGMYIVRILVEKHNGWIVAENKEKGGARIE FVIKEI
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=287, Percent_Identity=25.7839721254355, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=30, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1786783, Length=297, Percent_Identity=26.5993265993266, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1787894, Length=281, Percent_Identity=25.2669039145907, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1790861, Length=249, Percent_Identity=27.710843373494, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1790346, Length=281, Percent_Identity=25.6227758007117, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788713, Length=252, Percent_Identity=25.3968253968254, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI48994928, Length=226, Percent_Identity=27.8761061946903, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI145693157, Length=249, Percent_Identity=23.2931726907631, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786912, Length=221, Percent_Identity=26.6968325791855, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082128, Length=310, Percent_Identity=23.5483870967742, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1789149, Length=348, Percent_Identity=21.8390804597701, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790551, Length=298, Percent_Identity=22.4832214765101, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789808, Length=304, Percent_Identity=23.3552631578947, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1788279, Length=245, Percent_Identity=27.7551020408163, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 56283; Mature: 56283
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKASLKTQTISTFLLIIFLSMVCTITTIGVYFYIMYFGKDPMLRPNNYYQKQSDKIQQF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH IVSKGEDILEDKNRLELENLVPQKGIGYQITDLEGKIIYGNEKERIIKNKKQLIESINKT HHHCCHHHHHCCCCHHHHHCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCC DIDNLDRASVFGSKVKRYIPIVDSDSNVKGAAIIKYNIDTSVKEDKNEKIVHVFQVFLPF CCCCCHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCC SPFVYIIIFTIIFTRKLIKSIQHPINAIIDASNKIKEKDLNFEINYKSNNELGKLVSSFE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCCCHHHHHHHHHH EMKNALKESLNKQWIMEEDRKEIIKAIAHDLKTPITVIQGHVEVLMEGGVKDPIRVEKYL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHH NIIKANTERMGRLISDMNLTSEIENKNFDLVPVKVDIIEFLEKKQQDYKVLCKDKNIEFK HHHHCCHHHHHHHHHHCCCHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCEEE LFLEKNFNLNKEFSIDAERLEQILDNIISNAIRYTPDGKSIITKVKIHNNIIKFIVEDEG EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHEEEEEECCCEEEEEEECCC TGFSDKELCYIFEKFYRGDSSRSKEKGHSGLGMYIVRILVEKHNGWIVAENKEKGGARIE CCCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEE FVIKEI EEEECC >Mature Secondary Structure MKKASLKTQTISTFLLIIFLSMVCTITTIGVYFYIMYFGKDPMLRPNNYYQKQSDKIQQF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH IVSKGEDILEDKNRLELENLVPQKGIGYQITDLEGKIIYGNEKERIIKNKKQLIESINKT HHHCCHHHHHCCCCHHHHHCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCC DIDNLDRASVFGSKVKRYIPIVDSDSNVKGAAIIKYNIDTSVKEDKNEKIVHVFQVFLPF CCCCCHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCC SPFVYIIIFTIIFTRKLIKSIQHPINAIIDASNKIKEKDLNFEINYKSNNELGKLVSSFE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCCCHHHHHHHHHH EMKNALKESLNKQWIMEEDRKEIIKAIAHDLKTPITVIQGHVEVLMEGGVKDPIRVEKYL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHH NIIKANTERMGRLISDMNLTSEIENKNFDLVPVKVDIIEFLEKKQQDYKVLCKDKNIEFK HHHHCCHHHHHHHHHHCCCHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCEEE LFLEKNFNLNKEFSIDAERLEQILDNIISNAIRYTPDGKSIITKVKIHNNIIKFIVEDEG EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHEEEEEECCCEEEEEEECCC TGFSDKELCYIFEKFYRGDSSRSKEKGHSGLGMYIVRILVEKHNGWIVAENKEKGGARIE CCCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEE FVIKEI EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]