| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755616
Identifier: 170755616
GI number: 170755616
Start: 3273725
End: 3275746
Strand: Reverse
Name: 170755616
Synonym: CLD_1519
Alternate gene names: NA
Gene position: 3275746-3273725 (Counterclockwise)
Preceding gene: 170754726
Following gene: 170754874
Centisome position: 82.76
GC content: 22.11
Gene sequence:
>2022_bases ATGCCCCTACATAAAATTCCCCTATGTAGTTTTAAGTATGTAGGGGATAATACTCTTTCTAGTGGAATTTTTATATATGA TACTAGAGAAAGTATTGCTAAAAATAATAATATAACTAAGTTATATTATAAAAAAAATATAATAGAAATAGAAAAAGGTA GTATCCCAAACTTATTATATAAAGGTAATACTAAAATAGAAAAACTTTATAACAAATTACTATATAAAGAAAATAATTCT ATATATAAAATATATAATTATAATTTAAGTGTTGAAAATAGAAAGATAACTAAAGGATTACCTAAAAATTTAAGTAAAAA TGATGTTAAATTTATAAAAAACAAAAATTATAATTTGGAAAAAATAAGAATTAATGAATTTGCAAGAAATAAAGTTGTTC ATTTAGATATTTATAAGAATTTGGGATTTACTAGAGAGCAGCTAAAACAAGTTGAAAGAATTAATATTATTGAATTAAAT AATTCTAACAATATTTTTAATTTAGAGAATCATAAAAAATACAAGGATATTAATATAGGCTATAATATTAAATCATTAGC TAGAAACTTTTTTAAAGGTCTTGATATAAACCATAGTGTTAATTTGCAAATATATAATAAACCTACACAAATAATTAAAG GGAAAATTATTATAGTAGACAAATTAAAAATAAGAAGGCTTCACATTATTAAAAATAATATAAATATAAATTCCGATATC ATTAGAAATATAAATATTAAAGATAATATTATTAATGTTAGTAGAAAAGATAAAAAAAGAGTAGATATATCAACAAATGT TTATTTATATAGAAAGAGAGAAAAACCGACATATTTAAATAATTATACTAAACTGGCATATAAAACAAATGATTTTAAAC TTAATAAGTATAATTGTGTAAATCTATCAAGATCTCATAATAGAGATATCATAAGATATATTTATAGAAAGTTGTTCTAT AGTAATACTCTAAATACAATATATAAAACTAATAATATTTTAGGATTAAATAAAAATAATTTCCATAAGATAGGAAAGCA TAGCATAGTAGCTTTAGAAAAAAATATTACAACAAATATTGTTAGAACTAGTTTATTTTTTATTGAAAAAAATATTACAA CCAATATTGTTAGAACTAATTTATTTTTTATTGAAAATAATAAATTTAAAAATATCTATAAGGGTGAATCATTAGGTTTA AATAAGAGTAGAATTAAAATTTCAAAAAGAATTCATATGAATTTAATTAAAAAATTTAGAATAAATATTTTAAAATGGTT TTTTGATTTTAGAAATTTAAAGATAATTAAGAGATGGTGGGTATTAGAAGCAACTGATCCTAGGGATGAGAAAATATTAC CTATAAAAGATTACAATTATACTAATAATCCATTATTAGTAAACAGTAGAATTAAGCCTTATGGACATTTAATAAAACAG AATAAACATCCTATATCTTATGCACCATATATGGATTTCCAAGGGATTGATTTAGATTATGGAAAAGAAGAAATGCCATT ATCTATAGAAATAATGATAGATATGGTAAATATAGTGGGAATGATAGTCCAGCATAGCGCTAGTCAATTTGCTAATGTAA GTGGACAAGAAGCTATAGAGTTTATTATAGAATTATTATTAGACTGGATTAATATGGAGACTACAATAGAAGCAATGAAC AAAAGTGGGAGTAGAGAACACTATTTAAGAACATATAGATGGATAAGATGGGAAGCTGAAAAAGTGTGGTTTATGGCGGA CAAAGATCATACACAAGATAAAACTATGGGAATTAAATATGCAGGTATGTTATTCGCTAATTTAATAGACTATATGAAAT ACCACCATTTTGATGTAGTACCATTATGGAGAAATTTAAAATGTATGGATATAGAAAGGCAGTTTAATCGTGTAGCAACT AATGGAGATATTATAAAGATTTTAGATAAAGTAAAGGGAAATAGGCATTATATGATAGAAACACAAAATTTTGAAAAGAA AAATATATTAGGAGGTAAATAA
Upstream 100 bases:
>100_bases AGTTTAAAATTACAGCACCATATAGTCTAATGAACAATAGTCCTAATCCATTGTATTGTATTGCAATCAGATGGTATAAA TCAGAATAGAGGTGGTATAA
Downstream 100 bases:
>100_bases ATATGGCTTATGGGAGAAATGAATTTGGATATTATGATGAATATCAGGCAGTAGCAAGTAGTAATCAAGGGAGTTTTAAT AATCCTAGACAAAAAATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 673; Mature: 672
Protein sequence:
>673_residues MPLHKIPLCSFKYVGDNTLSSGIFIYDTRESIAKNNNITKLYYKKNIIEIEKGSIPNLLYKGNTKIEKLYNKLLYKENNS IYKIYNYNLSVENRKITKGLPKNLSKNDVKFIKNKNYNLEKIRINEFARNKVVHLDIYKNLGFTREQLKQVERINIIELN NSNNIFNLENHKKYKDINIGYNIKSLARNFFKGLDINHSVNLQIYNKPTQIIKGKIIIVDKLKIRRLHIIKNNININSDI IRNINIKDNIINVSRKDKKRVDISTNVYLYRKREKPTYLNNYTKLAYKTNDFKLNKYNCVNLSRSHNRDIIRYIYRKLFY SNTLNTIYKTNNILGLNKNNFHKIGKHSIVALEKNITTNIVRTSLFFIEKNITTNIVRTNLFFIENNKFKNIYKGESLGL NKSRIKISKRIHMNLIKKFRINILKWFFDFRNLKIIKRWWVLEATDPRDEKILPIKDYNYTNNPLLVNSRIKPYGHLIKQ NKHPISYAPYMDFQGIDLDYGKEEMPLSIEIMIDMVNIVGMIVQHSASQFANVSGQEAIEFIIELLLDWINMETTIEAMN KSGSREHYLRTYRWIRWEAEKVWFMADKDHTQDKTMGIKYAGMLFANLIDYMKYHHFDVVPLWRNLKCMDIERQFNRVAT NGDIIKILDKVKGNRHYMIETQNFEKKNILGGK
Sequences:
>Translated_673_residues MPLHKIPLCSFKYVGDNTLSSGIFIYDTRESIAKNNNITKLYYKKNIIEIEKGSIPNLLYKGNTKIEKLYNKLLYKENNS IYKIYNYNLSVENRKITKGLPKNLSKNDVKFIKNKNYNLEKIRINEFARNKVVHLDIYKNLGFTREQLKQVERINIIELN NSNNIFNLENHKKYKDINIGYNIKSLARNFFKGLDINHSVNLQIYNKPTQIIKGKIIIVDKLKIRRLHIIKNNININSDI IRNINIKDNIINVSRKDKKRVDISTNVYLYRKREKPTYLNNYTKLAYKTNDFKLNKYNCVNLSRSHNRDIIRYIYRKLFY SNTLNTIYKTNNILGLNKNNFHKIGKHSIVALEKNITTNIVRTSLFFIEKNITTNIVRTNLFFIENNKFKNIYKGESLGL NKSRIKISKRIHMNLIKKFRINILKWFFDFRNLKIIKRWWVLEATDPRDEKILPIKDYNYTNNPLLVNSRIKPYGHLIKQ NKHPISYAPYMDFQGIDLDYGKEEMPLSIEIMIDMVNIVGMIVQHSASQFANVSGQEAIEFIIELLLDWINMETTIEAMN KSGSREHYLRTYRWIRWEAEKVWFMADKDHTQDKTMGIKYAGMLFANLIDYMKYHHFDVVPLWRNLKCMDIERQFNRVAT NGDIIKILDKVKGNRHYMIETQNFEKKNILGGK >Mature_672_residues PLHKIPLCSFKYVGDNTLSSGIFIYDTRESIAKNNNITKLYYKKNIIEIEKGSIPNLLYKGNTKIEKLYNKLLYKENNSI YKIYNYNLSVENRKITKGLPKNLSKNDVKFIKNKNYNLEKIRINEFARNKVVHLDIYKNLGFTREQLKQVERINIIELNN SNNIFNLENHKKYKDINIGYNIKSLARNFFKGLDINHSVNLQIYNKPTQIIKGKIIIVDKLKIRRLHIIKNNININSDII RNINIKDNIINVSRKDKKRVDISTNVYLYRKREKPTYLNNYTKLAYKTNDFKLNKYNCVNLSRSHNRDIIRYIYRKLFYS NTLNTIYKTNNILGLNKNNFHKIGKHSIVALEKNITTNIVRTSLFFIEKNITTNIVRTNLFFIENNKFKNIYKGESLGLN KSRIKISKRIHMNLIKKFRINILKWFFDFRNLKIIKRWWVLEATDPRDEKILPIKDYNYTNNPLLVNSRIKPYGHLIKQN KHPISYAPYMDFQGIDLDYGKEEMPLSIEIMIDMVNIVGMIVQHSASQFANVSGQEAIEFIIELLLDWINMETTIEAMNK SGSREHYLRTYRWIRWEAEKVWFMADKDHTQDKTMGIKYAGMLFANLIDYMKYHHFDVVPLWRNLKCMDIERQFNRVATN GDIIKILDKVKGNRHYMIETQNFEKKNILGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80045; Mature: 79914
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHKIPLCSFKYVGDNTLSSGIFIYDTRESIAKNNNITKLYYKKNIIEIEKGSIPNLLY CCCCCCCCEEEEECCCCCCCCCEEEEECHHHHHCCCCEEEEEEECCEEEEECCCCCCEEE KGNTKIEKLYNKLLYKENNSIYKIYNYNLSVENRKITKGLPKNLSKNDVKFIKNKNYNLE ECCCHHHHHHHHHHEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCEE KIRINEFARNKVVHLDIYKNLGFTREQLKQVERINIIELNNSNNIFNLENHKKYKDINIG EEEECHHHCCCEEEEEECCCCCCCHHHHHHHHCEEEEEECCCCCEEECCCCCCEEEEECC YNIKSLARNFFKGLDINHSVNLQIYNKPTQIIKGKIIIVDKLKIRRLHIIKNNININSDI CCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHCCEEEEEECCEEEEEEEEECCCCCCHHH IRNINIKDNIINVSRKDKKRVDISTNVYLYRKREKPTYLNNYTKLAYKTNDFKLNKYNCV EEECCCCCCEEECCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEEECCCEEECCEEEE NLSRSHNRDIIRYIYRKLFYSNTLNTIYKTNNILGLNKNNFHKIGKHSIVALEKNITTNI ECCCCCCCHHHHHHHHHHHHCCCHHHEEECCCEEECCCCCCHHCCCCEEEEEECCCHHHH VRTSLFFIEKNITTNIVRTNLFFIENNKFKNIYKGESLGLNKSRIKISKRIHMNLIKKFR HHHEEEEEECCCEEEEEEEEEEEEECCCCCCEECCCCCCCCHHHEEEHHHHHHHHHHHHH INILKWFFDFRNLKIIKRWWVLEATDPRDEKILPIKDYNYTNNPLLVNSRIKPYGHLIKQ HHHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHC NKHPISYAPYMDFQGIDLDYGKEEMPLSIEIMIDMVNIVGMIVQHSASQFANVSGQEAIE CCCCCEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FIIELLLDWINMETTIEAMNKSGSREHYLRTYRWIRWEAEKVWFMADKDHTQDKTMGIKY HHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEEEEEECCCCCCCHHCCCHH AGMLFANLIDYMKYHHFDVVPLWRNLKCMDIERQFNRVATNGDIIKILDKVKGNRHYMIE HHHHHHHHHHHHHHCCCEEEECCCCCEEEEHHHHHHHHCCCCCCEEEHHHHCCCEEEEEE TQNFEKKNILGGK ECCCCCCCCCCCC >Mature Secondary Structure PLHKIPLCSFKYVGDNTLSSGIFIYDTRESIAKNNNITKLYYKKNIIEIEKGSIPNLLY CCCCCCCEEEEECCCCCCCCCEEEEECHHHHHCCCCEEEEEEECCEEEEECCCCCCEEE KGNTKIEKLYNKLLYKENNSIYKIYNYNLSVENRKITKGLPKNLSKNDVKFIKNKNYNLE ECCCHHHHHHHHHHEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCEE KIRINEFARNKVVHLDIYKNLGFTREQLKQVERINIIELNNSNNIFNLENHKKYKDINIG EEEECHHHCCCEEEEEECCCCCCCHHHHHHHHCEEEEEECCCCCEEECCCCCCEEEEECC YNIKSLARNFFKGLDINHSVNLQIYNKPTQIIKGKIIIVDKLKIRRLHIIKNNININSDI CCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHCCEEEEEECCEEEEEEEEECCCCCCHHH IRNINIKDNIINVSRKDKKRVDISTNVYLYRKREKPTYLNNYTKLAYKTNDFKLNKYNCV EEECCCCCCEEECCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEEECCCEEECCEEEE NLSRSHNRDIIRYIYRKLFYSNTLNTIYKTNNILGLNKNNFHKIGKHSIVALEKNITTNI ECCCCCCCHHHHHHHHHHHHCCCHHHEEECCCEEECCCCCCHHCCCCEEEEEECCCHHHH VRTSLFFIEKNITTNIVRTNLFFIENNKFKNIYKGESLGLNKSRIKISKRIHMNLIKKFR HHHEEEEEECCCEEEEEEEEEEEEECCCCCCEECCCCCCCCHHHEEEHHHHHHHHHHHHH INILKWFFDFRNLKIIKRWWVLEATDPRDEKILPIKDYNYTNNPLLVNSRIKPYGHLIKQ HHHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHC NKHPISYAPYMDFQGIDLDYGKEEMPLSIEIMIDMVNIVGMIVQHSASQFANVSGQEAIE CCCCCEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FIIELLLDWINMETTIEAMNKSGSREHYLRTYRWIRWEAEKVWFMADKDHTQDKTMGIKY HHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEEEEEECCCCCCCHHCCCHH AGMLFANLIDYMKYHHFDVVPLWRNLKCMDIERQFNRVATNGDIIKILDKVKGNRHYMIE HHHHHHHHHHHHHHCCCEEEECCCCCEEEEHHHHHHHHCCCCCCEEEHHHHCCCEEEEEE TQNFEKKNILGGK ECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA