| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754874
Identifier: 170754874
GI number: 170754874
Start: 3273447
End: 3273722
Strand: Reverse
Name: 170754874
Synonym: CLD_1520
Alternate gene names: NA
Gene position: 3273722-3273447 (Counterclockwise)
Preceding gene: 170755616
Following gene: 170755687
Centisome position: 82.71
GC content: 31.88
Gene sequence:
>276_bases ATGGCTTATGGGAGAAATGAATTTGGATATTATGATGAATATCAGGCAGTAGCAAGTAGTAATCAAGGGAGTTTTAATAA TCCTAGACAAAAAATGTGGATGGTACAAAGACGAAGTGAAGTTGGATGGAGGATAGAATTAATAACTAACTCCTTTGAAG AGGCAAAAGATAAAGCTAAATTTTTATTAGATTCTGGAGGACTATCTATGAATATAAATAGAGTTGTAGTAGCTGAAATA GTACCAATAGATAATATAATTACACCCTCTGTATAG
Upstream 100 bases:
>100_bases GAGATATTATAAAGATTTTAGATAAAGTAAAGGGAAATAGGCATTATATGATAGAAACACAAAATTTTGAAAAGAAAAAT ATATTAGGAGGTAAATAAAT
Downstream 100 bases:
>100_bases GAGATGATATTATGAAACTTATACAAGTTAAAAATGGATTATTAGAAGCTGAGAATTTTTTCTTGGCTTCTTCTTTTGCT GATTTTGCAGGAGAGAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MAYGRNEFGYYDEYQAVASSNQGSFNNPRQKMWMVQRRSEVGWRIELITNSFEEAKDKAKFLLDSGGLSMNINRVVVAEI VPIDNIITPSV
Sequences:
>Translated_91_residues MAYGRNEFGYYDEYQAVASSNQGSFNNPRQKMWMVQRRSEVGWRIELITNSFEEAKDKAKFLLDSGGLSMNINRVVVAEI VPIDNIITPSV >Mature_90_residues AYGRNEFGYYDEYQAVASSNQGSFNNPRQKMWMVQRRSEVGWRIELITNSFEEAKDKAKFLLDSGGLSMNINRVVVAEIV PIDNIITPSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10393; Mature: 10262
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYGRNEFGYYDEYQAVASSNQGSFNNPRQKMWMVQRRSEVGWRIELITNSFEEAKDKAK CCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH FLLDSGGLSMNINRVVVAEIVPIDNIITPSV EEECCCCCEEECCEEEEEEECCCCCCCCCCC >Mature Secondary Structure AYGRNEFGYYDEYQAVASSNQGSFNNPRQKMWMVQRRSEVGWRIELITNSFEEAKDKAK CCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH FLLDSGGLSMNINRVVVAEIVPIDNIITPSV EEECCCCCEEECCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA