Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754726

Identifier: 170754726

GI number: 170754726

Start: 3275758

End: 3277266

Strand: Reverse

Name: 170754726

Synonym: CLD_1518

Alternate gene names: NA

Gene position: 3277266-3275758 (Counterclockwise)

Preceding gene: 170754688

Following gene: 170755616

Centisome position: 82.8

GC content: 29.56

Gene sequence:

>1509_bases
ATGGCTACAGATAATTTTTATTGTGTAAATGGAAACACAAGCGTAAAAGATATAATTAAAAACTTAACAAAAGAAATAAC
ACAAAATGCTGGAATTTATAAATGGGACTTAGTTTCCCCTAGTGCAATAGATAAAGTTAGAAATTTTAGCTTGATAAAAG
CTACTACATCTTATGGAAAAGAATTTTACATTAGATTTGAAAGAACAGCAGCATTAACACCAACAAGTGAGGAACAAAAA
CTATTAGATAAAGAAAGGTACAGTAAACCATTTACTGAACAGGAAATAACACTTCTTAATAGATATGTTGAAGCTATGCC
TTTAACAAGCTTTGAGAAAAATTTAATAAAGAAAAATTTAGATTCCTTAACTACAGATGAACAAAATGATTTACAACAAT
TACGAGTAAGAAAGAATATAACGAATGATAGAGAACTATTTTTGCTTAGAAAATATTATAATGGTGAAAGTCTTTCTACT
GCTGAACAAAATGAATTAGACACTTATAGAAATGTACACAATTTAACTGCTCAAGAGTTGATAGATTGGAGTAAACTCAA
AACAAATACAAAACTTTATGCTGATTCTATAATAAATATACTTTATAAACAATATGCTGGATCGGTATTATCTCAAAGTG
AACAAAATTCTTTGGCGAGTTATAGAAATAGCATGGAACTGACACAAAGTGAAAAAGAAAAATTAGCAATGCTAAAAGGT
AAAATGGATAATAGAAATCATATGTATATAACTATAGGTAAAGAGATTCATGACACTAAAAAAATTGTAGAGGTAGATGG
AGAACAAACAGAAGTAGATATTAAAGATTTAGTTGAGGAGAGTTGTTCTGTACCATCAAGATTTGCATGGTATAAGAAGC
TTGCACCAGAAATAGGAGAGTGGCTACCTATAGAATATTATATAAATATCACAAAAGATGCAGTGAATATAATGTTAGAA
GGGGATAAAAGTGCAGATAACTACCCTTATAATAACAATTTAACAAGTTATGCGTATATTGGAGCTATTAAGCCAATGGA
AGATTCAGCATCCACAGATGATAAATATAACTTTGGAGTAGTTACATCTTCAGATATACCACCATTTTTTACAAAAAAGT
TTGGTGAAAGAACTGCTACAGGAATTACAGATGTGTGTATGGTAGGTAATAAGATAGGTATGCCAATGCAACCTCATTAT
CCTGAATTTAGTACAACAACAACTTTTGTAGATAAATGTAATACGGAAGGAAGTAGATGGAATCATAAAAAACATAAATT
TGATGAAATTATTTTATTTCATCCTGTTGATGGTGAAAGAGGCAAGCTGATTAATGTATTGGCTGGGGATGGTAATGGAA
TATGGAATAAGGATACGTTAGTTTATAAAAAAGGTACAGAAGAAGAAGAAAATTATAAGAAGTTTAAAATTACAGCACCA
TATAGTCTAATGAACAATAGTCCTAATCCATTGTATTGTATTGCAATCAGATGGTATAAATCAGAATAG

Upstream 100 bases:

>100_bases
CAGATGATAGTTATATAAAGGGTGTATTTACAATAGATTTAAATACTTTAAAAATAACAAAATTAAATAAAAATAAGAAG
AAGTATTAGGAGGTAGAAAA

Downstream 100 bases:

>100_bases
AGGTGGTATAAATGCCCCTACATAAAATTCCCCTATGTAGTTTTAAGTATGTAGGGGATAATACTCTTTCTAGTGGAATT
TTTATATATGATACTAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MATDNFYCVNGNTSVKDIIKNLTKEITQNAGIYKWDLVSPSAIDKVRNFSLIKATTSYGKEFYIRFERTAALTPTSEEQK
LLDKERYSKPFTEQEITLLNRYVEAMPLTSFEKNLIKKNLDSLTTDEQNDLQQLRVRKNITNDRELFLLRKYYNGESLST
AEQNELDTYRNVHNLTAQELIDWSKLKTNTKLYADSIINILYKQYAGSVLSQSEQNSLASYRNSMELTQSEKEKLAMLKG
KMDNRNHMYITIGKEIHDTKKIVEVDGEQTEVDIKDLVEESCSVPSRFAWYKKLAPEIGEWLPIEYYINITKDAVNIMLE
GDKSADNYPYNNNLTSYAYIGAIKPMEDSASTDDKYNFGVVTSSDIPPFFTKKFGERTATGITDVCMVGNKIGMPMQPHY
PEFSTTTTFVDKCNTEGSRWNHKKHKFDEIILFHPVDGERGKLINVLAGDGNGIWNKDTLVYKKGTEEEENYKKFKITAP
YSLMNNSPNPLYCIAIRWYKSE

Sequences:

>Translated_502_residues
MATDNFYCVNGNTSVKDIIKNLTKEITQNAGIYKWDLVSPSAIDKVRNFSLIKATTSYGKEFYIRFERTAALTPTSEEQK
LLDKERYSKPFTEQEITLLNRYVEAMPLTSFEKNLIKKNLDSLTTDEQNDLQQLRVRKNITNDRELFLLRKYYNGESLST
AEQNELDTYRNVHNLTAQELIDWSKLKTNTKLYADSIINILYKQYAGSVLSQSEQNSLASYRNSMELTQSEKEKLAMLKG
KMDNRNHMYITIGKEIHDTKKIVEVDGEQTEVDIKDLVEESCSVPSRFAWYKKLAPEIGEWLPIEYYINITKDAVNIMLE
GDKSADNYPYNNNLTSYAYIGAIKPMEDSASTDDKYNFGVVTSSDIPPFFTKKFGERTATGITDVCMVGNKIGMPMQPHY
PEFSTTTTFVDKCNTEGSRWNHKKHKFDEIILFHPVDGERGKLINVLAGDGNGIWNKDTLVYKKGTEEEENYKKFKITAP
YSLMNNSPNPLYCIAIRWYKSE
>Mature_501_residues
ATDNFYCVNGNTSVKDIIKNLTKEITQNAGIYKWDLVSPSAIDKVRNFSLIKATTSYGKEFYIRFERTAALTPTSEEQKL
LDKERYSKPFTEQEITLLNRYVEAMPLTSFEKNLIKKNLDSLTTDEQNDLQQLRVRKNITNDRELFLLRKYYNGESLSTA
EQNELDTYRNVHNLTAQELIDWSKLKTNTKLYADSIINILYKQYAGSVLSQSEQNSLASYRNSMELTQSEKEKLAMLKGK
MDNRNHMYITIGKEIHDTKKIVEVDGEQTEVDIKDLVEESCSVPSRFAWYKKLAPEIGEWLPIEYYINITKDAVNIMLEG
DKSADNYPYNNNLTSYAYIGAIKPMEDSASTDDKYNFGVVTSSDIPPFFTKKFGERTATGITDVCMVGNKIGMPMQPHYP
EFSTTTTFVDKCNTEGSRWNHKKHKFDEIILFHPVDGERGKLINVLAGDGNGIWNKDTLVYKKGTEEEENYKKFKITAPY
SLMNNSPNPLYCIAIRWYKSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57793; Mature: 57662

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDNFYCVNGNTSVKDIIKNLTKEITQNAGIYKWDLVSPSAIDKVRNFSLIKATTSYGK
CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCEEEEEEHHCCC
EFYIRFERTAALTPTSEEQKLLDKERYSKPFTEQEITLLNRYVEAMPLTSFEKNLIKKNL
EEEEEEECEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DSLTTDEQNDLQQLRVRKNITNDRELFLLRKYYNGESLSTAEQNELDTYRNVHNLTAQEL
HHCCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHH
IDWSKLKTNTKLYADSIINILYKQYAGSVLSQSEQNSLASYRNSMELTQSEKEKLAMLKG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KMDNRNHMYITIGKEIHDTKKIVEVDGEQTEVDIKDLVEESCSVPSRFAWYKKLAPEIGE
CCCCCCEEEEEECCHHHCCHHHEEECCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHHC
WLPIEYYINITKDAVNIMLEGDKSADNYPYNNNLTSYAYIGAIKPMEDSASTDDKYNFGV
CCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEE
VTSSDIPPFFTKKFGERTATGITDVCMVGNKIGMPMQPHYPEFSTTTTFVDKCNTEGSRW
EECCCCCHHHHHHHCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
NHKKHKFDEIILFHPVDGERGKLINVLAGDGNGIWNKDTLVYKKGTEEEENYKKFKITAP
CCCHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEECC
YSLMNNSPNPLYCIAIRWYKSE
HHHHCCCCCCEEEEEEEEECCC
>Mature Secondary Structure 
ATDNFYCVNGNTSVKDIIKNLTKEITQNAGIYKWDLVSPSAIDKVRNFSLIKATTSYGK
CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCEEEEEEHHCCC
EFYIRFERTAALTPTSEEQKLLDKERYSKPFTEQEITLLNRYVEAMPLTSFEKNLIKKNL
EEEEEEECEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DSLTTDEQNDLQQLRVRKNITNDRELFLLRKYYNGESLSTAEQNELDTYRNVHNLTAQEL
HHCCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHH
IDWSKLKTNTKLYADSIINILYKQYAGSVLSQSEQNSLASYRNSMELTQSEKEKLAMLKG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KMDNRNHMYITIGKEIHDTKKIVEVDGEQTEVDIKDLVEESCSVPSRFAWYKKLAPEIGE
CCCCCCEEEEEECCHHHCCHHHEEECCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHHC
WLPIEYYINITKDAVNIMLEGDKSADNYPYNNNLTSYAYIGAIKPMEDSASTDDKYNFGV
CCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEE
VTSSDIPPFFTKKFGERTATGITDVCMVGNKIGMPMQPHYPEFSTTTTFVDKCNTEGSRW
EECCCCCHHHHHHHCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
NHKKHKFDEIILFHPVDGERGKLINVLAGDGNGIWNKDTLVYKKGTEEEENYKKFKITAP
CCCHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEECC
YSLMNNSPNPLYCIAIRWYKSE
HHHHCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA