| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is lacA [H]
Identifier: 170755507
GI number: 170755507
Start: 2301246
End: 2301860
Strand: Reverse
Name: lacA [H]
Synonym: CLD_2478
Alternate gene names: 170755507
Gene position: 2301860-2301246 (Counterclockwise)
Preceding gene: 170755408
Following gene: 170754582
Centisome position: 58.15
GC content: 32.52
Gene sequence:
>615_bases ATGAATCAGAAAGATAGAATGTTAGCAGGGCTTCCATATAAAGCGTGCTTAGATGGATTACCAGAAGAACGAATGGCAAA TAAAAAGAAAATTTATGAGTATAACCATTGCTTCCCAGATGAACATGAAAAAATCCATAAATTAATAAGAGATATTCTTG GAAAAGCAGGTGCAGATGTACATATAGAGGCACCCTTTTATTGTGATTATGGAAAGAATATTCAGGTTGGAGATAACTTT TTTGCAAATTACAACTGTACAATTCTAGATGTGGGAAAAGTAATTATAGGTAATAATGTACAATTTGCTCCAAATGTTTC TTTGTATACAGCAGGTCATCCCATACATCCTGATTCACGAAATTCTGGATATGAATATGGAATTGGTATAACAATAGGAG ATAATGTGTGGCTGGGAGGAAATGTTGTTGTAAATCCTGGAGTTCATATTGGAAATAACGTTGTTATTGGTTCGGGAAGT GTTGTTACAAAAGACATTCCAGACAATGTGATAGCAATAGGAAATCCATGTAAAGTTATTCGTGAAATTACAGAAGAAGA TCGTAAGTATTATTATAAAAATTATGAATTTGATGTTGATGATTATAAGGAATAG
Upstream 100 bases:
>100_bases AATGAGTTCTAGTATCCCTTTCAAAATGTTATAATGTAAGTTAAAAGATAAAGTGAAATTTATTTTCAATATTAATATAA TGTGGAAGGTGGAGACAATT
Downstream 100 bases:
>100_bases TTTATTTACAAATTAAAATTATTTATGCAATGGGGTGAGAAAATGATTTTAGCCATAGAATGTTTTATTGCATGTGTACT ATTTACTCTTATGATTTTAC
Product: O-acetyltransferase family protein
Products: NA
Alternate protein names: GAT; Thiogalactoside acetyltransferase [H]
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MNQKDRMLAGLPYKACLDGLPEERMANKKKIYEYNHCFPDEHEKIHKLIRDILGKAGADVHIEAPFYCDYGKNIQVGDNF FANYNCTILDVGKVIIGNNVQFAPNVSLYTAGHPIHPDSRNSGYEYGIGITIGDNVWLGGNVVVNPGVHIGNNVVIGSGS VVTKDIPDNVIAIGNPCKVIREITEEDRKYYYKNYEFDVDDYKE
Sequences:
>Translated_204_residues MNQKDRMLAGLPYKACLDGLPEERMANKKKIYEYNHCFPDEHEKIHKLIRDILGKAGADVHIEAPFYCDYGKNIQVGDNF FANYNCTILDVGKVIIGNNVQFAPNVSLYTAGHPIHPDSRNSGYEYGIGITIGDNVWLGGNVVVNPGVHIGNNVVIGSGS VVTKDIPDNVIAIGNPCKVIREITEEDRKYYYKNYEFDVDDYKE >Mature_204_residues MNQKDRMLAGLPYKACLDGLPEERMANKKKIYEYNHCFPDEHEKIHKLIRDILGKAGADVHIEAPFYCDYGKNIQVGDNF FANYNCTILDVGKVIIGNNVQFAPNVSLYTAGHPIHPDSRNSGYEYGIGITIGDNVWLGGNVVVNPGVHIGNNVVIGSGS VVTKDIPDNVIAIGNPCKVIREITEEDRKYYYKNYEFDVDDYKE
Specific function: May assist cellular detoxification by acetylating non- metabolizable pyranosides, thereby preventing their reentry into the cell [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786537, Length=198, Percent_Identity=49.4949494949495, Blast_Score=208, Evalue=2e-55, Organism=Escherichia coli, GI1786664, Length=182, Percent_Identity=47.2527472527472, Blast_Score=189, Evalue=9e-50, Organism=Escherichia coli, GI1788367, Length=141, Percent_Identity=31.2056737588652, Blast_Score=65, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322243, Length=188, Percent_Identity=53.1914893617021, Blast_Score=194, Evalue=1e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.18 [H]
Molecular weight: Translated: 22874; Mature: 22874
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKDRMLAGLPYKACLDGLPEERMANKKKIYEYNHCFPDEHEKIHKLIRDILGKAGADV CCCCCCEEECCCHHHHHCCCCHHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCE HIEAPFYCDYGKNIQVGDNFFANYNCTILDVGKVIIGNNVQFAPNVSLYTAGHPIHPDSR EEECCEEECCCCEEEECCCEEECCCEEEEECCEEEECCCEEECCCEEEEECCCCCCCCCC NSGYEYGIGITIGDNVWLGGNVVVNPGVHIGNNVVIGSGSVVTKDIPDNVIAIGNPCKVI CCCEEEEEEEEECCCEEECCEEEECCCEEECCEEEEECCCEEEECCCCCEEEECCHHHHH REITEEDRKYYYKNYEFDVDDYKE HHHHHHHHHEECCCCEECCCCCCC >Mature Secondary Structure MNQKDRMLAGLPYKACLDGLPEERMANKKKIYEYNHCFPDEHEKIHKLIRDILGKAGADV CCCCCCEEECCCHHHHHCCCCHHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCE HIEAPFYCDYGKNIQVGDNFFANYNCTILDVGKVIIGNNVQFAPNVSLYTAGHPIHPDSR EEECCEEECCCCEEEECCCEEECCCEEEEECCEEEECCCEEECCCEEEEECCCCCCCCCC NSGYEYGIGITIGDNVWLGGNVVVNPGVHIGNNVVIGSGSVVTKDIPDNVIAIGNPCKVI CCCEEEEEEEEECCCEEECCEEEECCCEEECCEEEEECCCEEEECCCCCEEEECCHHHHH REITEEDRKYYYKNYEFDVDDYKE HHHHHHHHHEECCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3922433; 3901000; 9278503; 6444453; 11937062 [H]