| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754582
Identifier: 170754582
GI number: 170754582
Start: 2300709
End: 2301203
Strand: Reverse
Name: 170754582
Synonym: CLD_2479
Alternate gene names: NA
Gene position: 2301203-2300709 (Counterclockwise)
Preceding gene: 170755507
Following gene: 170756532
Centisome position: 58.14
GC content: 29.09
Gene sequence:
>495_bases ATGATTTTAGCCATAGAATGTTTTATTGCATGTGTACTATTTACTCTTATGATTTTACCATCACTATATAAGGAACCAAT CAAACATATTATGTCATATCCTACAGAGATTAGAAAAAGGGTGGAAAGTCTACCACAATATAAAGATGTTATACAGAAAA AAGAAAAAAAGCATTTAATAGTAAAGATAATTGCAGTTTTTATGTTTGCTATTATTTTGGCTGTAGTAGCCTACTTTTCA GGAGCTAAAAGTTTTTCAAAAGCTTATATTCATGTATTTACTTTGTTTTTTGCAGTAAACATTTATGATATGATTGTTTT AGATATAGGTCTTTTTTGTCATAGTAAAAAAACTAGAATACCTGGTACAGAGGATATGGATAAAGAATATAGGAGTCCGT GGCATCATATAAAAGGGGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTGGAGGAATGGTTCATTTT ATATCAATAATATAG
Upstream 100 bases:
>100_bases AGATCGTAAGTATTATTATAAAAATTATGAATTTGATGTTGATGATTATAAGGAATAGTTTATTTACAAATTAAAATTAT TTATGCAATGGGGTGAGAAA
Downstream 100 bases:
>100_bases TATTTAAGCGGGGAACCCAAATCTTAGATTTGGTGTGAGTCGCTTACTACTTCGAGAATGGGAGAAGTAGTTTCATTAAT GAGTATAGTATATAGCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MILAIECFIACVLFTLMILPSLYKEPIKHIMSYPTEIRKRVESLPQYKDVIQKKEKKHLIVKIIAVFMFAIILAVVAYFS GAKSFSKAYIHVFTLFFAVNIYDMIVLDIGLFCHSKKTRIPGTEDMDKEYRSPWHHIKGAGIGTIIGAVVALLSGGMVHF ISII
Sequences:
>Translated_164_residues MILAIECFIACVLFTLMILPSLYKEPIKHIMSYPTEIRKRVESLPQYKDVIQKKEKKHLIVKIIAVFMFAIILAVVAYFS GAKSFSKAYIHVFTLFFAVNIYDMIVLDIGLFCHSKKTRIPGTEDMDKEYRSPWHHIKGAGIGTIIGAVVALLSGGMVHF ISII >Mature_164_residues MILAIECFIACVLFTLMILPSLYKEPIKHIMSYPTEIRKRVESLPQYKDVIQKKEKKHLIVKIIAVFMFAIILAVVAYFS GAKSFSKAYIHVFTLFFAVNIYDMIVLDIGLFCHSKKTRIPGTEDMDKEYRSPWHHIKGAGIGTIIGAVVALLSGGMVHF ISII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18566; Mature: 18566
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILAIECFIACVLFTLMILPSLYKEPIKHIMSYPTEIRKRVESLPQYKDVIQKKEKKHLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHH VKIIAVFMFAIILAVVAYFSGAKSFSKAYIHVFTLFFAVNIYDMIVLDIGLFCHSKKTRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PGTEDMDKEYRSPWHHIKGAGIGTIIGAVVALLSGGMVHFISII CCCCCHHHHHHCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure MILAIECFIACVLFTLMILPSLYKEPIKHIMSYPTEIRKRVESLPQYKDVIQKKEKKHLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHH VKIIAVFMFAIILAVVAYFSGAKSFSKAYIHVFTLFFAVNIYDMIVLDIGLFCHSKKTRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PGTEDMDKEYRSPWHHIKGAGIGTIIGAVVALLSGGMVHFISII CCCCCHHHHHHCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA