| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755408
Identifier: 170755408
GI number: 170755408
Start: 2304363
End: 2304743
Strand: Reverse
Name: 170755408
Synonym: CLD_2474
Alternate gene names: NA
Gene position: 2304743-2304363 (Counterclockwise)
Preceding gene: 170754740
Following gene: 170755507
Centisome position: 58.23
GC content: 28.08
Gene sequence:
>381_bases ATGAAGGAAGCACTAGCACCAAAAGGCAAGTTTGTTTTTGCTGCTGAGACAACTGCTAATATAATTTCTGATAGGGAAGA GTACCTTGAAAATTGTCACGTAAAGACCAAAGAAGGTTATTATATAATCTTCAAAAGTAAAAGTTTTTATAATAAACACA AAAAAATATTATCCACACCAAGTTTATATGAGTTATATGATGGTGATAATTTACTAGGTAAAGAAGAAATGGATTTTCGT ATAAAATTATATGATTTTGGAGAATTAGACAAGTTAATATTAAAGGCAGGATTTAAAGGAAGCTATGTATTCAGTGATTT CGAAAGAAACAAACCTATAGACAGAAATAGTGAAACCTTTTTATATGAATGTTATATTTAA
Upstream 100 bases:
>100_bases AAAATTTTCTCCAAAGGAAAAATATGATTATATTTTTATTACATCTGGTTCATTTTAGTTATTTGTTGATGAGGATATTG CCTTTAATGTTCTGGTAAAA
Downstream 100 bases:
>100_bases CAATAAAATATTTTTCTAGCCAATTTTAACTTTAAAACCTACCTTAGCCATTGAAATATAAGGCTTAAGATAGGTTTTTG TTTTGTAATACTGTTTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKEALAPKGKFVFAAETTANIISDREEYLENCHVKTKEGYYIIFKSKSFYNKHKKILSTPSLYELYDGDNLLGKEEMDFR IKLYDFGELDKLILKAGFKGSYVFSDFERNKPIDRNSETFLYECYI
Sequences:
>Translated_126_residues MKEALAPKGKFVFAAETTANIISDREEYLENCHVKTKEGYYIIFKSKSFYNKHKKILSTPSLYELYDGDNLLGKEEMDFR IKLYDFGELDKLILKAGFKGSYVFSDFERNKPIDRNSETFLYECYI >Mature_126_residues MKEALAPKGKFVFAAETTANIISDREEYLENCHVKTKEGYYIIFKSKSFYNKHKKILSTPSLYELYDGDNLLGKEEMDFR IKLYDFGELDKLILKAGFKGSYVFSDFERNKPIDRNSETFLYECYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14817; Mature: 14817
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEALAPKGKFVFAAETTANIISDREEYLENCHVKTKEGYYIIFKSKSFYNKHKKILSTP CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEEECCCEEEEEECCCHHHHHHHHCCCC SLYELYDGDNLLGKEEMDFRIKLYDFGELDKLILKAGFKGSYVFSDFERNKPIDRNSETF CEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEE LYECYI EEEEEC >Mature Secondary Structure MKEALAPKGKFVFAAETTANIISDREEYLENCHVKTKEGYYIIFKSKSFYNKHKKILSTP CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEEECCCEEEEEECCCHHHHHHHHCCCC SLYELYDGDNLLGKEEMDFRIKLYDFGELDKLILKAGFKGSYVFSDFERNKPIDRNSETF CEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEE LYECYI EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA