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The map label for this gene is cbiD

Identifier: 170755135

GI number: 170755135

Start: 1051986

End: 1053065

Strand: Direct

Name: cbiD

Synonym: CLD_3625

Alternate gene names: 170755135

Gene position: 1051986-1053065 (Clockwise)

Preceding gene: 170754845

Following gene: 170756463

Centisome position: 26.58

GC content: 33.61

Gene sequence:

>1080_bases
ATGCTAGATTTATATGTAAATTGTGATGGAAAAAAGCTAAGATGCGGATATACCACAGGTTCCTGTGCAGCTGCAGCAGC
TAAGGCAGCTGCTATAGCTCTTTTTTATAATAAAAAATTAAAAGAAATAAATATAGATACTCCTAAAGGCATAGAGCTTA
CCATTCCCATTGAAAAAATAGTAGAAGATGAGAGCTTTGTAGAATGTGCAGTTATAAAGGATGGTGGAGATGATGTGGAC
ATAACCCACGGCATAGAAATATGGGCTAGGGCAGAAAAAAAATCTAGTGGATATACTCTAAAAGGTGGAAAAGGTGTTGG
AGTAGTTTGCGGTGAAGGCTTGTATGTCCCAAAAGGAGAACCAGCAATAAATCCGGTTCCACGTTCTATGATAGAAAAAG
AGGTAAGGTCTGTTATCCCAAGGGATTCTGGTGTGGAAATAACTATATTTGTTCCAAAGGGAGAGGAGATAGCTAAAAAA
ACCTTTAATCCAAGATTAAATATTATAGGGGGGATATCCATATTAGGGACAACAGGAATAGTAATGCCTATGTCCGAAGA
TGCTCTAAAAGCCTCCATAGAATTAGAAATAAATCAAAAAACCTGCCATGGTGAAAAAGAATTAATACTTTTATTTGGTA
ATATGGGTGAAAAAATGGCAAAAGAGCTTAATTTGAAAGAAAACAATATGGTTATAATGTCCAACTATGTGGGGTTTGCA
CTTAATTGTTGTATGGCAAGAAAACTAGAGAAAGTAACTATAGTAGGGCATATAGGGAAAATATCTAAAATAGCTTCCGG
TTGTTTTAATACCCATAGTAGAATATGTGATACTAGACTAGAAACATTAGCTTTAGAATTAGCACTTATGGGATATGATA
AAGATTTAGTAACTAAAATATATAATCAAAAAACTACAGAGGGCGCGGTAAATTTATTAGGGGAAGGTTACGAAAAACTT
TATAAAAATTTAGGGAAAAAAATAATAAGAAAAATAGAGCAATATACCTATGATTCCATAAAAGCAGATATTGTAATGTA
TTCTATGGGAAGAGGGATACTATATTCTTCTATAGAATAA

Upstream 100 bases:

>100_bases
AGCTAAGCTGTGGGCAAATAAAAATAAGAATGTAAAATGTTTTTTTAGTGAAAAGAAAAAAGCAACTCATAGTATTAACA
AAATATAATTTGGAGGGTTT

Downstream 100 bases:

>100_bases
ATATTAATCAAGCTACTGCAAATTTTAGACTTATTGGAGGAATTATTTCTATTTTATAAGGAAGTTATATATTTTTAACT
AGATATTGTATATTGAAAGA

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MLDLYVNCDGKKLRCGYTTGSCAAAAAKAAAIALFYNKKLKEINIDTPKGIELTIPIEKIVEDESFVECAVIKDGGDDVD
ITHGIEIWARAEKKSSGYTLKGGKGVGVVCGEGLYVPKGEPAINPVPRSMIEKEVRSVIPRDSGVEITIFVPKGEEIAKK
TFNPRLNIIGGISILGTTGIVMPMSEDALKASIELEINQKTCHGEKELILLFGNMGEKMAKELNLKENNMVIMSNYVGFA
LNCCMARKLEKVTIVGHIGKISKIASGCFNTHSRICDTRLETLALELALMGYDKDLVTKIYNQKTTEGAVNLLGEGYEKL
YKNLGKKIIRKIEQYTYDSIKADIVMYSMGRGILYSSIE

Sequences:

>Translated_359_residues
MLDLYVNCDGKKLRCGYTTGSCAAAAAKAAAIALFYNKKLKEINIDTPKGIELTIPIEKIVEDESFVECAVIKDGGDDVD
ITHGIEIWARAEKKSSGYTLKGGKGVGVVCGEGLYVPKGEPAINPVPRSMIEKEVRSVIPRDSGVEITIFVPKGEEIAKK
TFNPRLNIIGGISILGTTGIVMPMSEDALKASIELEINQKTCHGEKELILLFGNMGEKMAKELNLKENNMVIMSNYVGFA
LNCCMARKLEKVTIVGHIGKISKIASGCFNTHSRICDTRLETLALELALMGYDKDLVTKIYNQKTTEGAVNLLGEGYEKL
YKNLGKKIIRKIEQYTYDSIKADIVMYSMGRGILYSSIE
>Mature_359_residues
MLDLYVNCDGKKLRCGYTTGSCAAAAAKAAAIALFYNKKLKEINIDTPKGIELTIPIEKIVEDESFVECAVIKDGGDDVD
ITHGIEIWARAEKKSSGYTLKGGKGVGVVCGEGLYVPKGEPAINPVPRSMIEKEVRSVIPRDSGVEITIFVPKGEEIAKK
TFNPRLNIIGGISILGTTGIVMPMSEDALKASIELEINQKTCHGEKELILLFGNMGEKMAKELNLKENNMVIMSNYVGFA
LNCCMARKLEKVTIVGHIGKISKIASGCFNTHSRICDTRLETLALELALMGYDKDLVTKIYNQKTTEGAVNLLGEGYEKL
YKNLGKKIIRKIEQYTYDSIKADIVMYSMGRGILYSSIE

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 39339; Mature: 39339

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLYVNCDGKKLRCGYTTGSCAAAAAKAAAIALFYNKKLKEINIDTPKGIELTIPIEKI
CEEEEEECCCCEEEEECCCCHHHHHHHHHHEEEEEECCCCEEEECCCCCCEEEEECHHHH
VEDESFVECAVIKDGGDDVDITHGIEIWARAEKKSSGYTLKGGKGVGVVCGEGLYVPKGE
CCCCCEEEEEEEECCCCCEEEECCEEEEEEECCCCCCEEEECCCEEEEEECCCEECCCCC
PAINPVPRSMIEKEVRSVIPRDSGVEITIFVPKGEEIAKKTFNPRLNIIGGISILGTTGI
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCEEEEECEEEECCCCE
VMPMSEDALKASIELEINQKTCHGEKELILLFGNMGEKMAKELNLKENNMVIMSNYVGFA
EEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCEEEEECCHHHH
LNCCMARKLEKVTIVGHIGKISKIASGCFNTHSRICDTRLETLALELALMGYDKDLVTKI
HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
YNQKTTEGAVNLLGEGYEKLYKNLGKKIIRKIEQYTYDSIKADIVMYSMGRGILYSSIE
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEECCC
>Mature Secondary Structure
MLDLYVNCDGKKLRCGYTTGSCAAAAAKAAAIALFYNKKLKEINIDTPKGIELTIPIEKI
CEEEEEECCCCEEEEECCCCHHHHHHHHHHEEEEEECCCCEEEECCCCCCEEEEECHHHH
VEDESFVECAVIKDGGDDVDITHGIEIWARAEKKSSGYTLKGGKGVGVVCGEGLYVPKGE
CCCCCEEEEEEEECCCCCEEEECCEEEEEEECCCCCCEEEECCCEEEEEECCCEECCCCC
PAINPVPRSMIEKEVRSVIPRDSGVEITIFVPKGEEIAKKTFNPRLNIIGGISILGTTGI
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCEEEEECEEEECCCCE
VMPMSEDALKASIELEINQKTCHGEKELILLFGNMGEKMAKELNLKENNMVIMSNYVGFA
EEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCEEEEECCHHHH
LNCCMARKLEKVTIVGHIGKISKIASGCFNTHSRICDTRLETLALELALMGYDKDLVTKI
HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
YNQKTTEGAVNLLGEGYEKLYKNLGKKIIRKIEQYTYDSIKADIVMYSMGRGILYSSIE
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA