Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is yqkA [H]

Identifier: 170754845

GI number: 170754845

Start: 1051380

End: 1051973

Strand: Direct

Name: yqkA [H]

Synonym: CLD_3626

Alternate gene names: 170754845

Gene position: 1051380-1051973 (Clockwise)

Preceding gene: 170755644

Following gene: 170755135

Centisome position: 26.56

GC content: 26.6

Gene sequence:

>594_bases
ATGAGCGAGGAAAAACAACTTAGAATAATAGAAGTAGTTCCACACAACCCTAAATGGAAAATAGAATATGGAAAAGAAGC
AGAAAAAATATATAACATAATGAAGGATGAAATAGTTCAAATACATCATATTGGTAGCACATCTATAGAAGGAATATATG
CAAAACCCATAATAGATATATTGGTGGAAGTTGAGAATATTAACAATGTGGATAATTATAATGAAAAAATGAAGTCTTTA
GGATATATTCCTAAGGGAGAATACGGAATAAAAGGACGTAGATTTTTCTTAAAAGGATTATATGATAGAACTCACCATGT
TCATATATTTGAAAAAGGTGATTCTGAAATAGAAAGACATATAAATTTTAGAGACTACATGATAGAACATAAAGAAGAAG
CTAAACAATATGAAAAGCTAAAGAAAGAATTAGCCTTAGAATTTAGATATGATATAGACTCTTATTGCATTGGTAAAGAT
AGTTTTATTAAAAAAATAGATGAAAAAGCTAAGCTGTGGGCAAATAAAAATAAGAATGTAAAATGTTTTTTTAGTGAAAA
GAAAAAAGCAACTCATAGTATTAACAAAATATAA

Upstream 100 bases:

>100_bases
ACATTTAGGTTAAGAGGTTATAATACAACAATTAAGTTAATACAGATGTCTTTACGTAGAATAAATAATGAATCTTCTAT
AAATAAAGGAGTTTTAAAAT

Downstream 100 bases:

>100_bases
TTTGGAGGGTTTATGCTAGATTTATATGTAAATTGTGATGGAAAAAAGCTAAGATGCGGATATACCACAGGTTCCTGTGC
AGCTGCAGCAGCTAAGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSEEKQLRIIEVVPHNPKWKIEYGKEAEKIYNIMKDEIVQIHHIGSTSIEGIYAKPIIDILVEVENINNVDNYNEKMKSL
GYIPKGEYGIKGRRFFLKGLYDRTHHVHIFEKGDSEIERHINFRDYMIEHKEEAKQYEKLKKELALEFRYDIDSYCIGKD
SFIKKIDEKAKLWANKNKNVKCFFSEKKKATHSINKI

Sequences:

>Translated_197_residues
MSEEKQLRIIEVVPHNPKWKIEYGKEAEKIYNIMKDEIVQIHHIGSTSIEGIYAKPIIDILVEVENINNVDNYNEKMKSL
GYIPKGEYGIKGRRFFLKGLYDRTHHVHIFEKGDSEIERHINFRDYMIEHKEEAKQYEKLKKELALEFRYDIDSYCIGKD
SFIKKIDEKAKLWANKNKNVKCFFSEKKKATHSINKI
>Mature_196_residues
SEEKQLRIIEVVPHNPKWKIEYGKEAEKIYNIMKDEIVQIHHIGSTSIEGIYAKPIIDILVEVENINNVDNYNEKMKSLG
YIPKGEYGIKGRRFFLKGLYDRTHHVHIFEKGDSEIERHINFRDYMIEHKEEAKQYEKLKKELALEFRYDIDSYCIGKDS
FIKKIDEKAKLWANKNKNVKCFFSEKKKATHSINKI

Specific function: Unknown

COG id: COG2320

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR007344 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF04229 UPF0157 [H]

EC number: NA

Molecular weight: Translated: 23438; Mature: 23307

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEKQLRIIEVVPHNPKWKIEYGKEAEKIYNIMKDEIVQIHHIGSTSIEGIYAKPIIDI
CCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHEEEECCCCCCCCEEHHHHHHH
LVEVENINNVDNYNEKMKSLGYIPKGEYGIKGRRFFLKGLYDRTHHVHIFEKGDSEIERH
HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHH
INFRDYMIEHKEEAKQYEKLKKELALEFRYDIDSYCIGKDSFIKKIDEKAKLWANKNKNV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCHHHHHHHHHHHHHHHCCCCCE
KCFFSEKKKATHSINKI
EEEECCHHHHHHHHCCC
>Mature Secondary Structure 
SEEKQLRIIEVVPHNPKWKIEYGKEAEKIYNIMKDEIVQIHHIGSTSIEGIYAKPIIDI
CCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHEEEECCCCCCCCEEHHHHHHH
LVEVENINNVDNYNEKMKSLGYIPKGEYGIKGRRFFLKGLYDRTHHVHIFEKGDSEIERH
HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHH
INFRDYMIEHKEEAKQYEKLKKELALEFRYDIDSYCIGKDSFIKKIDEKAKLWANKNKNV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCHHHHHHHHHHHHHHHCCCCCE
KCFFSEKKKATHSINKI
EEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]