| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755069
Identifier: 170755069
GI number: 170755069
Start: 3388182
End: 3388766
Strand: Reverse
Name: 170755069
Synonym: CLD_1414
Alternate gene names: NA
Gene position: 3388766-3388182 (Counterclockwise)
Preceding gene: 170757781
Following gene: 170756811
Centisome position: 85.61
GC content: 29.74
Gene sequence:
>585_bases GTGATAGAGATAAAAAAAAAATTACAGCGAAAACTAGAAGATCTACATTGTGATCAATGTGATATATGTTTATGTGGAGG TTGTTGTGATACTGCTACTAGTATATGTGATTGTTGTGTAGATCCTATGGAAGATTTATTAAATCAATTAAAAAATATTT TAGCACCTAATGCTACAATTCAAGTAACCCTTGATACAGGAACAACACAGTCTTTTCAAGTAAATCAAATAGTATCAATA GACGATAGTATAATTAATATACAGAACACTAGTTTTATTTCAATTTGTAATATTTCAAGAGTTAGATGGACAGATATAAG TACACTAGATCAAATTAATTTATTACCACCAGTATGTACTTGCGACGAATGCGATTGCTGTGAAAGACCATTAAGAGAAA ATCTAAATAAGTTTATAAATGCTAATGTAGAATTGCAGTTTAAAGGACAACAAAATCCTAATACTTTCCAAGGCTTAACG ATAAGAAAAGTTGGCCTTGGAATAGTAATAGGACAAAATATAGTTGATGGTGCTCCAGATGCATATTCAATTTGTAAGAT TACAGGTTTTAATGTTATGTCGTAA
Upstream 100 bases:
>100_bases TAGATAACATTAATTAAATATAAGTCATATAATATATTGGCAACAAATAATATGTATTGCTAGATTCAAGTATCTGAAAG GATGTTGAGATTTATGCTAT
Downstream 100 bases:
>100_bases GGATTATTTTAAATGAAGAGCATATTTGATTCAAATAAGAATATAAAAAAGCTCAGCTAATAATTAAACTCCTTGTATTT AATAAAATGCAAAGAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MIEIKKKLQRKLEDLHCDQCDICLCGGCCDTATSICDCCVDPMEDLLNQLKNILAPNATIQVTLDTGTTQSFQVNQIVSI DDSIINIQNTSFISICNISRVRWTDISTLDQINLLPPVCTCDECDCCERPLRENLNKFINANVELQFKGQQNPNTFQGLT IRKVGLGIVIGQNIVDGAPDAYSICKITGFNVMS
Sequences:
>Translated_194_residues MIEIKKKLQRKLEDLHCDQCDICLCGGCCDTATSICDCCVDPMEDLLNQLKNILAPNATIQVTLDTGTTQSFQVNQIVSI DDSIINIQNTSFISICNISRVRWTDISTLDQINLLPPVCTCDECDCCERPLRENLNKFINANVELQFKGQQNPNTFQGLT IRKVGLGIVIGQNIVDGAPDAYSICKITGFNVMS >Mature_194_residues MIEIKKKLQRKLEDLHCDQCDICLCGGCCDTATSICDCCVDPMEDLLNQLKNILAPNATIQVTLDTGTTQSFQVNQIVSI DDSIINIQNTSFISICNISRVRWTDISTLDQINLLPPVCTCDECDCCERPLRENLNKFINANVELQFKGQQNPNTFQGLT IRKVGLGIVIGQNIVDGAPDAYSICKITGFNVMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21467; Mature: 21467
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEIKKKLQRKLEDLHCDQCDICLCGGCCDTATSICDCCVDPMEDLLNQLKNILAPNATI CCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE QVTLDTGTTQSFQVNQIVSIDDSIINIQNTSFISICNISRVRWTDISTLDQINLLPPVCT EEEECCCCCCCEEECEEEECCCCEEEECCCCEEEEECCCEEEECCCCCHHHCCCCCCCCC CDECDCCERPLRENLNKFINANVELQFKGQQNPNTFQGLTIRKVGLGIVIGQNIVDGAPD CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECEEEEECCCHHCCCCC AYSICKITGFNVMS CEEEEEEECCCCCC >Mature Secondary Structure MIEIKKKLQRKLEDLHCDQCDICLCGGCCDTATSICDCCVDPMEDLLNQLKNILAPNATI CCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE QVTLDTGTTQSFQVNQIVSIDDSIINIQNTSFISICNISRVRWTDISTLDQINLLPPVCT EEEECCCCCCCEEECEEEECCCCEEEECCCCEEEEECCCEEEECCCCCHHHCCCCCCCCC CDECDCCERPLRENLNKFINANVELQFKGQQNPNTFQGLTIRKVGLGIVIGQNIVDGAPD CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEECEEEEECCCHHCCCCC AYSICKITGFNVMS CEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA