Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757781

Identifier: 170757781

GI number: 170757781

Start: 3389327

End: 3389917

Strand: Reverse

Name: 170757781

Synonym: CLD_1412

Alternate gene names: NA

Gene position: 3389917-3389327 (Counterclockwise)

Preceding gene: 170756823

Following gene: 170755069

Centisome position: 85.64

GC content: 25.55

Gene sequence:

>591_bases
ATGAATATTATAACGGTTAAAATAAACGGTGTTGAATATAATTTAAAAGGAGAAGAACAAGAGGATTATCTTCACAAAGT
GGCTAGATATGTGGATAAAAAGATAGCAGACATACTAGAAAACAATCCTAAATTAAGTACTTCTTCAGCTTCTATATTGA
CAGCAATAAATGCTATAGATGAGGGACTAAAAAAAGAAGAACAAATAGAAAATTTACAATTAGAAATAGATAAACTAAAA
AAAGTACAGCATCATCAAAATTTAAAAGTAGAAGAAATAAGAAATTTATTAGCAGAAGAAAAGGAAAAGAATAAAGATTT
AAAAGCGCAGGACGTAGATGATTCTGCAAAAGAATATAAAGAAAAACTGGAGAAATTACAAGTACAAATGGAACTTATGG
AGAAAACTGCAAAGAAATACATGGAAGAAAATAATAAAATTAAAATTCAAAATAAGGAACTAAAATTTCAATTACAATCT
TCTAAATATAAAGTTTTAGATCTAGAAAAAAAATTAATGGACAGTCAATTAACTTTGGCTAAAGAAAAGAAAAAATTAAA
TCCACTACAGGTAAAAGATATGAAAAAGTAA

Upstream 100 bases:

>100_bases
ACTAATTATACTAAAATTTAAAGATAAAATAATAAATCCTATTTTCGTAAATATTAGTTCAAATAACATTTATAATAGGA
ATATCTAAGAGGGTGTATTC

Downstream 100 bases:

>100_bases
ATAAAAAATAACCGTACACACTTATGCTAATGTGTGTACGGTTATTTTTTTATAATAAGTGTTAATAAAATAAACGTACC
ATTTAAAATTATTTGCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNIITVKINGVEYNLKGEEQEDYLHKVARYVDKKIADILENNPKLSTSSASILTAINAIDEGLKKEEQIENLQLEIDKLK
KVQHHQNLKVEEIRNLLAEEKEKNKDLKAQDVDDSAKEYKEKLEKLQVQMELMEKTAKKYMEENNKIKIQNKELKFQLQS
SKYKVLDLEKKLMDSQLTLAKEKKKLNPLQVKDMKK

Sequences:

>Translated_196_residues
MNIITVKINGVEYNLKGEEQEDYLHKVARYVDKKIADILENNPKLSTSSASILTAINAIDEGLKKEEQIENLQLEIDKLK
KVQHHQNLKVEEIRNLLAEEKEKNKDLKAQDVDDSAKEYKEKLEKLQVQMELMEKTAKKYMEENNKIKIQNKELKFQLQS
SKYKVLDLEKKLMDSQLTLAKEKKKLNPLQVKDMKK
>Mature_196_residues
MNIITVKINGVEYNLKGEEQEDYLHKVARYVDKKIADILENNPKLSTSSASILTAINAIDEGLKKEEQIENLQLEIDKLK
KVQHHQNLKVEEIRNLLAEEKEKNKDLKAQDVDDSAKEYKEKLEKLQVQMELMEKTAKKYMEENNKIKIQNKELKFQLQS
SKYKVLDLEKKLMDSQLTLAKEKKKLNPLQVKDMKK

Specific function: Unknown

COG id: COG3027

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22968; Mature: 22968

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIITVKINGVEYNLKGEEQEDYLHKVARYVDKKIADILENNPKLSTSSASILTAINAID
CEEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
EGLKKEEQIENLQLEIDKLKKVQHHQNLKVEEIRNLLAEEKEKNKDLKAQDVDDSAKEYK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
EKLEKLQVQMELMEKTAKKYMEENNKIKIQNKELKFQLQSSKYKVLDLEKKLMDSQLTLA
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHH
KEKKKLNPLQVKDMKK
HHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNIITVKINGVEYNLKGEEQEDYLHKVARYVDKKIADILENNPKLSTSSASILTAINAID
CEEEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
EGLKKEEQIENLQLEIDKLKKVQHHQNLKVEEIRNLLAEEKEKNKDLKAQDVDDSAKEYK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
EKLEKLQVQMELMEKTAKKYMEENNKIKIQNKELKFQLQSSKYKVLDLEKKLMDSQLTLA
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHH
KEKKKLNPLQVKDMKK
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA