| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756811
Identifier: 170756811
GI number: 170756811
Start: 3385152
End: 3386030
Strand: Reverse
Name: 170756811
Synonym: CLD_1416
Alternate gene names: NA
Gene position: 3386030-3385152 (Counterclockwise)
Preceding gene: 170755069
Following gene: 170754840
Centisome position: 85.54
GC content: 32.54
Gene sequence:
>879_bases ATGGCTATTAATTCAAAAGATTTTATTCCACGTCCAGGTTTTGTAAATAAACAAGGTTGTTTACCAGATCCAGTGGAGAT AACTTGTATTCAAGTACCTAAAGTTTTTGATCAATGTTTAATAAAAGAATGTTTAAAACCTACAGATGATTGCGAACAGT TATGTAAACAGATACCAAATGTTATGGAACCAGCGCAGGTTAGATGCGTGGGTTGTTGTAAAGACTTAAAAGTAAAGGTT AACTCTGTTACTAAATGCCCTGTTTCAAATGGTAAACCTGGACACAAGAAGATAACTATTAATTTTACAGTTACTTTTGA TGTAGATGTAGAGGTAGAAAAAAATGGAGTTAAACACACAGAAACATTAAAATATTCAGTAAATAGAACTATAACTGCTC CTAACTTGTATTGTCCAGATGCTATAGCTAAAACTATAATAGGTAAAGAATGTACATCAGCAGAGGAAGTTGATCAGCAG TTTATAAAACTAGAAGTAGTAGGGGAGTGCCTAAGCACAGATATTACAAAGGTAGATTGTGATAGGGATTGTTGCAGTTG TACTTGTACTTGTGAAGAGGATGAAGATAAGAAAGTATTCTTATGTATCACATTAGGATTATTTATAATAATCAAATGTG AAATAGTAGTTCAATTAATGGTTCCAGCTTATGGCTATTGTCCAGTACCAGAAGAATGTAAGCGCTCACATGATCCATGT AAGGAATTTATGGAAAGAGAACTTCCAACTCTTTATCCACCACAGGAAATGGATAATTTATTTGATGATTGTGATGAGAA ATGCATTGAAGAAGAAGAAGAGGACGATATAGTAAGTGATAGTATAGTAAGTAGTAGTAGTATAATAAGTAGTAATTAA
Upstream 100 bases:
>100_bases ATTAAAATATATTTTTACTTATCACACTTATTTTTTTATATGCATACTATATATTGAGATAAAACAATGTTTCTTCTATA TGAAAAGGAGGATATTTAAT
Downstream 100 bases:
>100_bases CCTATAAGTTAAAATTAATATAAGAATTATTTTAAAGGCATTTATCATATTGATTTATTTTATATTATGGATTCTTATGC TACGAATACATTAAGAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MAINSKDFIPRPGFVNKQGCLPDPVEITCIQVPKVFDQCLIKECLKPTDDCEQLCKQIPNVMEPAQVRCVGCCKDLKVKV NSVTKCPVSNGKPGHKKITINFTVTFDVDVEVEKNGVKHTETLKYSVNRTITAPNLYCPDAIAKTIIGKECTSAEEVDQQ FIKLEVVGECLSTDITKVDCDRDCCSCTCTCEEDEDKKVFLCITLGLFIIIKCEIVVQLMVPAYGYCPVPEECKRSHDPC KEFMERELPTLYPPQEMDNLFDDCDEKCIEEEEEDDIVSDSIVSSSSIISSN
Sequences:
>Translated_292_residues MAINSKDFIPRPGFVNKQGCLPDPVEITCIQVPKVFDQCLIKECLKPTDDCEQLCKQIPNVMEPAQVRCVGCCKDLKVKV NSVTKCPVSNGKPGHKKITINFTVTFDVDVEVEKNGVKHTETLKYSVNRTITAPNLYCPDAIAKTIIGKECTSAEEVDQQ FIKLEVVGECLSTDITKVDCDRDCCSCTCTCEEDEDKKVFLCITLGLFIIIKCEIVVQLMVPAYGYCPVPEECKRSHDPC KEFMERELPTLYPPQEMDNLFDDCDEKCIEEEEEDDIVSDSIVSSSSIISSN >Mature_291_residues AINSKDFIPRPGFVNKQGCLPDPVEITCIQVPKVFDQCLIKECLKPTDDCEQLCKQIPNVMEPAQVRCVGCCKDLKVKVN SVTKCPVSNGKPGHKKITINFTVTFDVDVEVEKNGVKHTETLKYSVNRTITAPNLYCPDAIAKTIIGKECTSAEEVDQQF IKLEVVGECLSTDITKVDCDRDCCSCTCTCEEDEDKKVFLCITLGLFIIIKCEIVVQLMVPAYGYCPVPEECKRSHDPCK EFMERELPTLYPPQEMDNLFDDCDEKCIEEEEEDDIVSDSIVSSSSIISSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32667; Mature: 32536
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 8.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINSKDFIPRPGFVNKQGCLPDPVEITCIQVPKVFDQCLIKECLKPTDDCEQLCKQIPN CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHH VMEPAQVRCVGCCKDLKVKVNSVTKCPVSNGKPGHKKITINFTVTFDVDVEVEKNGVKHT HCCCHHHHHHCCCHHCEEEECCEEECCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCH ETLKYSVNRTITAPNLYCPDAIAKTIIGKECTSAEEVDQQFIKLEVVGECLSTDITKVDC HHEEEECCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC DRDCCSCTCTCEEDEDKKVFLCITLGLFIIIKCEIVVQLMVPAYGYCPVPEECKRSHDPC CCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHH KEFMERELPTLYPPQEMDNLFDDCDEKCIEEEEEDDIVSDSIVSSSSIISSN HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure AINSKDFIPRPGFVNKQGCLPDPVEITCIQVPKVFDQCLIKECLKPTDDCEQLCKQIPN CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHH VMEPAQVRCVGCCKDLKVKVNSVTKCPVSNGKPGHKKITINFTVTFDVDVEVEKNGVKHT HCCCHHHHHHCCCHHCEEEECCEEECCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCH ETLKYSVNRTITAPNLYCPDAIAKTIIGKECTSAEEVDQQFIKLEVVGECLSTDITKVDC HHEEEECCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC DRDCCSCTCTCEEDEDKKVFLCITLGLFIIIKCEIVVQLMVPAYGYCPVPEECKRSHDPC CCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHH KEFMERELPTLYPPQEMDNLFDDCDEKCIEEEEEDDIVSDSIVSSSSIISSN HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA