| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is tagA [H]
Identifier: 170754771
GI number: 170754771
Start: 3335607
End: 3336323
Strand: Reverse
Name: tagA [H]
Synonym: CLD_1448
Alternate gene names: 170754771
Gene position: 3336323-3335607 (Counterclockwise)
Preceding gene: 170757232
Following gene: 170756850
Centisome position: 84.29
GC content: 26.78
Gene sequence:
>717_bases ATGAAAACAGAAATGTTAGGATATAGTATATTTAATGGTAGTAAAGAAGAACTTTTAAATATAATAGATAAATATGAAAA AGTTAATATAATTTCTGGTAATCCAGAAGTTTTATATAATGGACTAAATAATGAAGAGTTATTCAAAAATTTTACAGATA AAGATTCTATAATTATACCAGACGGAGTAGGTGTGGTTTTGGCTTCAAAAATTATAAAAAGTCCTGTAAAAGAAAAAATT GCAGGGATTGAAGTAATGGATTCTATATTGAAAAAGTGTAATGAGAATGGTAAAGCTGTGTATTTGCTAGGAACTACGGA AGATGTATTAAAAGAATGTGAGAGAAAGTTATTAATAAAGTACAAGAACTTAAATATTGTAGGTAAGCACAATGGTTTTT TTGATATGGATAATTGTAAGGATATATTAGAAGATATTAAAGAGTCAAAACCTTATGCTTTATTTATAGCTATGGGATGT CCAAGACAAGAAAAATTTATAAGTAGATATATGAACGAACTTCCTTGTAATATTTATATGGGTGTAGGAGGAAGTTTTGA TGTGTTTGCTGGAAAAGTAAAAAGAGCACCTAGATGGATGATAAATTGTAATTTAGAGTGGTTATATAGAGTGGTTAAAG AGCCTTATAGAATAAAAAGATTAGCATCTATACCTAAATTTTTATTAAAAGCAGCATTAAATAAAAGAAGCTATTAA
Upstream 100 bases:
>100_bases ATTACTGCACAAGTATCATTAATTATAGTTTATTTACAAAGTTTGATATAATAACTATAATTAATGTATATTGTGCATTT TTAATTTTAGGGGTGAATAA
Downstream 100 bases:
>100_bases TATTTATTTTTAAATTAAAAAGCTACGAATTTGCAATATTATATTGTTAAACTCATAGCTTTTTATTATAAAAACTTATA TTTTAATTGACTATTTTTTA
Product: WecB/TagA/CpsF family glycosyl transferase
Products: NA
Alternate protein names: Major teichoic acid biosynthesis protein A; N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MKTEMLGYSIFNGSKEELLNIIDKYEKVNIISGNPEVLYNGLNNEELFKNFTDKDSIIIPDGVGVVLASKIIKSPVKEKI AGIEVMDSILKKCNENGKAVYLLGTTEDVLKECERKLLIKYKNLNIVGKHNGFFDMDNCKDILEDIKESKPYALFIAMGC PRQEKFISRYMNELPCNIYMGVGGSFDVFAGKVKRAPRWMINCNLEWLYRVVKEPYRIKRLASIPKFLLKAALNKRSY
Sequences:
>Translated_238_residues MKTEMLGYSIFNGSKEELLNIIDKYEKVNIISGNPEVLYNGLNNEELFKNFTDKDSIIIPDGVGVVLASKIIKSPVKEKI AGIEVMDSILKKCNENGKAVYLLGTTEDVLKECERKLLIKYKNLNIVGKHNGFFDMDNCKDILEDIKESKPYALFIAMGC PRQEKFISRYMNELPCNIYMGVGGSFDVFAGKVKRAPRWMINCNLEWLYRVVKEPYRIKRLASIPKFLLKAALNKRSY >Mature_238_residues MKTEMLGYSIFNGSKEELLNIIDKYEKVNIISGNPEVLYNGLNNEELFKNFTDKDSIIIPDGVGVVLASKIIKSPVKEKI AGIEVMDSILKKCNENGKAVYLLGTTEDVLKECERKLLIKYKNLNIVGKHNGFFDMDNCKDILEDIKESKPYALFIAMGC PRQEKFISRYMNELPCNIYMGVGGSFDVFAGKVKRAPRWMINCNLEWLYRVVKEPYRIKRLASIPKFLLKAALNKRSY
Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=161, Percent_Identity=36.6459627329193, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: =2.4.1.187 [H]
Molecular weight: Translated: 27240; Mature: 27240
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEMLGYSIFNGSKEELLNIIDKYEKVNIISGNPEVLYNGLNNEELFKNFTDKDSIIIP CCCCCCCHHHCCCCHHHHHHHHHHHHEEEEECCCHHEEECCCCHHHHHHCCCCCCCEEEC DGVGVVLASKIIKSPVKEKIAGIEVMDSILKKCNENGKAVYLLGTTEDVLKECERKLLIK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHEEE YKNLNIVGKHNGFFDMDNCKDILEDIKESKPYALFIAMGCPRQEKFISRYMNELPCNIYM ECCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEE GVGGSFDVFAGKVKRAPRWMINCNLEWLYRVVKEPYRIKRLASIPKFLLKAALNKRSY ECCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTEMLGYSIFNGSKEELLNIIDKYEKVNIISGNPEVLYNGLNNEELFKNFTDKDSIIIP CCCCCCCHHHCCCCHHHHHHHHHHHHEEEEECCCHHEEECCCCHHHHHHCCCCCCCEEEC DGVGVVLASKIIKSPVKEKIAGIEVMDSILKKCNENGKAVYLLGTTEDVLKECERKLLIK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHEEE YKNLNIVGKHNGFFDMDNCKDILEDIKESKPYALFIAMGCPRQEKFISRYMNELPCNIYM ECCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEE GVGGSFDVFAGKVKRAPRWMINCNLEWLYRVVKEPYRIKRLASIPKFLLKAALNKRSY ECCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1906926; 9384377; 11882717 [H]