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The map label for this gene is rfbP [H]

Identifier: 170757232

GI number: 170757232

Start: 3336521

End: 3337174

Strand: Reverse

Name: rfbP [H]

Synonym: CLD_1447

Alternate gene names: 170757232

Gene position: 3337174-3336521 (Counterclockwise)

Preceding gene: 170757096

Following gene: 170754771

Centisome position: 84.31

GC content: 26.15

Gene sequence:

>654_bases
ATGGAGTTTAAAATGCCAATTATAGATGTAGAAAAAGATATAAAAAGTAAAAAAGTACAATTTGTTATAAAGAGATTTTC
AGACATAATACTATCCTTAATAGGAATAATTGTACTATCTCCAATATATTTAATTTTATTTTTATGGATAAAATTAGATT
CAAAGGGTCCAGCCTTATTTAAACAAGTTAGAGTTGGAAAAGATAATAAAGATTTTGTAATATACAAGTTTAGAACAATG
ATAGTAGATGCAGAAAAAAAGAAAAAGATAGATTTAGAAATAGAAGATATATCTAACTTTGTTTTCCAAAGCAAAAGTGA
TAATAGAATTACAAAGGCAGGAAAATTTTTGAGAAAAACTAGTTTAGATGAAATACCTCAATTATTTAATGTCTTAAAAG
GAAATATGACTTTAGTAGGTCCAAGACCAGAAATTCCAGATGTAGTTAAACATTATCCCAAGGAGTATAATCAAAGATTA
TTAGTTACACCAGGTATAACAGGATTAGCACAGGTTAGTGGACGTGGAGAAATAGAGCTGGGCAAAACTGTTTATTATGA
TTTAACTTACATAAAGAATTTTTCAGTTTGGTATGATATAAAAATATTATTCCAAACAGCATTTAAAGTTTTTAAAAATG
AAGGTGCTTTTTAA

Upstream 100 bases:

>100_bases
TAAATAGAAATGAAGTTAAATCTATTATATCTTATATTAAGATGTTTTTAAAAGATAGAAAAAATAAAGCCGTTGCTTAA
TATTATTTAGGAGGTTAAAA

Downstream 100 bases:

>100_bases
TATAAATTTAGCTTTAGTTAATTTAGTTTAAAAATTAAAGATAATTTGAATCTTTTATAGATAGCAGCATTAGTGTTTGT
TAATTATAAGGTAAAATATT

Product: sugar transferase family protein

Products: NA

Alternate protein names: Galactosyl-P-P-undecaprenol synthase [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MEFKMPIIDVEKDIKSKKVQFVIKRFSDIILSLIGIIVLSPIYLILFLWIKLDSKGPALFKQVRVGKDNKDFVIYKFRTM
IVDAEKKKKIDLEIEDISNFVFQSKSDNRITKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRL
LVTPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEGAF

Sequences:

>Translated_217_residues
MEFKMPIIDVEKDIKSKKVQFVIKRFSDIILSLIGIIVLSPIYLILFLWIKLDSKGPALFKQVRVGKDNKDFVIYKFRTM
IVDAEKKKKIDLEIEDISNFVFQSKSDNRITKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRL
LVTPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEGAF
>Mature_217_residues
MEFKMPIIDVEKDIKSKKVQFVIKRFSDIILSLIGIIVLSPIYLILFLWIKLDSKGPALFKQVRVGKDNKDFVIYKFRTM
IVDAEKKKKIDLEIEDISNFVFQSKSDNRITKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRL
LVTPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEGAF

Specific function: Is responsible for transferring galactose-1-phosphate to the lipid precursor undecaprenol phosphate in the first steps of O-polysaccharide biosynthesis [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=213, Percent_Identity=40.8450704225352, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: =2.7.8.6 [H]

Molecular weight: Translated: 25122; Mature: 25122

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKMPIIDVEKDIKSKKVQFVIKRFSDIILSLIGIIVLSPIYLILFLWIKLDSKGPALF
CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KQVRVGKDNKDFVIYKFRTMIVDAEKKKKIDLEIEDISNFVFQSKSDNRITKAGKFLRKT
HHHHCCCCCCCEEEEEEEEEEEECCHHCEECEEHHHHHHHHHCCCCCCHHHHHHHHHHHC
SLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRLLVTPGITGLAQVSGRGEIEL
CHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCHHHCCEEEECCCCCHHHHCCCCCCEEE
GKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEGAF
CCEEEEEEHHHCCCCCEEHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEFKMPIIDVEKDIKSKKVQFVIKRFSDIILSLIGIIVLSPIYLILFLWIKLDSKGPALF
CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KQVRVGKDNKDFVIYKFRTMIVDAEKKKKIDLEIEDISNFVFQSKSDNRITKAGKFLRKT
HHHHCCCCCCCEEEEEEEEEEEECCHHCEECEEHHHHHHHHHCCCCCCHHHHHHHHHHHC
SLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRLLVTPGITGLAQVSGRGEIEL
CHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCHHHCCEEEECCCCCHHHHCCCCCCEEE
GKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEGAF
CCEEEEEEHHHCCCCCEEHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]