| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754742
Identifier: 170754742
GI number: 170754742
Start: 1444887
End: 1445243
Strand: Direct
Name: 170754742
Synonym: CLD_3259
Alternate gene names: NA
Gene position: 1444887-1445243 (Clockwise)
Preceding gene: 170755277
Following gene: 170757493
Centisome position: 36.5
GC content: 30.81
Gene sequence:
>357_bases ATGAAAATAGCAATGCCTAAGAATGAAAAAATAATTAACCAACATTTTGGGAAAAGTAAAAGCTTTGCCATAGTAACAGT AGAAGATAATAAAATTATAGATATTAAAGATATATCAACAGAAAGTTTACAACATAATCATGGTGGTCTATCCAGTTTGT TAGTAGAAGAAAAAGTTGAACTAGTTATAACAGGAGGCATTGGTCAAGGCGCCTATGATGCTTTAATTAAGGAAGGACTA AAAGTTATAAGAGGGGCAAAGGGAACAATTGAAGATGTATTACAACAATATTTAAGAGGAGAACTTCAAGATAGAAAAGT AATGTGTAATCATCACGGTGAACATCATCATCATTAA
Upstream 100 bases:
>100_bases CCAAGATTAAAACATATATTGCTAATTATAAATTAGAAGTATATAGAAATATGTGTTACTATAGCAATATAGGAAAATAT ATAATTGGAGTGTGATATAA
Downstream 100 bases:
>100_bases AAATAAAAGGGAAGTACCTAGTACTTTCCTTTTATTTTTTTATTTAATATATATTTTATGTTTTAAATTAATCATTTTTA CTAATTAAGGGCTAAATTAT
Product: dinitrogenase iron-molybdenum cofactor family protein
Products: NA
Alternate protein names: Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis; C_GCAxxG_C_C Family Protein; Dinitrogenase Iron-Molybdenum Cofactor Family Protein
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKIAMPKNEKIINQHFGKSKSFAIVTVEDNKIIDIKDISTESLQHNHGGLSSLLVEEKVELVITGGIGQGAYDALIKEGL KVIRGAKGTIEDVLQQYLRGELQDRKVMCNHHGEHHHH
Sequences:
>Translated_118_residues MKIAMPKNEKIINQHFGKSKSFAIVTVEDNKIIDIKDISTESLQHNHGGLSSLLVEEKVELVITGGIGQGAYDALIKEGL KVIRGAKGTIEDVLQQYLRGELQDRKVMCNHHGEHHHH >Mature_118_residues MKIAMPKNEKIINQHFGKSKSFAIVTVEDNKIIDIKDISTESLQHNHGGLSSLLVEEKVELVITGGIGQGAYDALIKEGL KVIRGAKGTIEDVLQQYLRGELQDRKVMCNHHGEHHHH
Specific function: Unknown
COG id: COG1433
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13157; Mature: 13157
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAMPKNEKIINQHFGKSKSFAIVTVEDNKIIDIKDISTESLQHNHGGLSSLLVEEKVE CCCCCCCCCHHHHHHCCCCCCEEEEEECCCEEEEEECCCHHHHHCCCCCHHHHHHHCCEE LVITGGIGQGAYDALIKEGLKVIRGAKGTIEDVLQQYLRGELQDRKVMCNHHGEHHHH EEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure MKIAMPKNEKIINQHFGKSKSFAIVTVEDNKIIDIKDISTESLQHNHGGLSSLLVEEKVE CCCCCCCCCHHHHHHCCCCCCEEEEEECCCEEEEEECCCHHHHHCCCCCHHHHHHHCCEE LVITGGIGQGAYDALIKEGLKVIRGAKGTIEDVLQQYLRGELQDRKVMCNHHGEHHHH EEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA