| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754688
Identifier: 170754688
GI number: 170754688
Start: 3277278
End: 3278264
Strand: Reverse
Name: 170754688
Synonym: CLD_1517
Alternate gene names: NA
Gene position: 3278264-3277278 (Counterclockwise)
Preceding gene: 170755770
Following gene: 170754726
Centisome position: 82.82
GC content: 25.84
Gene sequence:
>987_bases TTGAGCTTACCTAAATATATAATTAATTTTGAAGAGCTTACAGAGGATTTAAAAAATCACTTATTAAGTCTGATAGATGA TAATATAAGAACTAATTATCCAGAGATAAATACCAACAATATACAAGATTTACTACAACAGTTAAAAGATTTATTGCCAA GTGTACAATATGAAGGGCTGAAGAAAAAAATTGATACTTTTATATACAGAAAAATTGAAGGCATTCAAAAGGTAAAAGGT ATATTATTAGATATCCCAGCAATACAAAATAATTATACGGAACAATTTAAATTTGATAAAGATGTATATATTACAGGATT GCATTTTAATCAAACAGGATGGAAAAAGGAAGACAGATTTAGCTTAGAAGTTAATAAAATCAAAATAATAGATAATGCAA CAACTAAGGAAATAGGGGAGCATAAATACTTTAACACATTCTATAAAGTAAATGCTAATACGCCTATTTCTTTTATTTTC CATAATTTAAGCGGTAATAGTAGACAAACAATGGTGGATTTAGAGTATATAGATGGAGAAGATTCTAGTATTACACCAGG CATAGAGGATATAGATAATGAATGGGATATAGCGGTAGTAATGAATTGGGAAGAGAATACAGATGCAGATATAGATTTGT ATGGAGAGATAGGAGATAAAGAAGTTTGGTATGGTAATAAATCCTATGATGGATTTTATCTTAATTTTGATTATACAACT CATAAAACAAATAAAAATCCTGAAATAATAAGTGTTAAAGGGTATAAAAATAAAAAACTTAATATATATGTTCATAATTA TAATGCGCGGGAATTAAAAGAACCTGTAGCATTAGAAATATATCAAAATCGATCTTATGGTAATAAACTACTTAAAAAAA TTAGTGTTAATTTAGAGGCAGATGATAGTTATATAAAGGGTGTATTTACAATAGATTTAAATACTTTAAAAATAACAAAA TTAAATAAAAATAAGAAGAAGTATTAG
Upstream 100 bases:
>100_bases TTTAATATTAAGAACCCTTATTTAAAGATAACACAAACAGCTCAAGTTTATCCAAGAAATGATACAAGTTCAATCTTTGA ATATAAAGAAGGTGCTTAAT
Downstream 100 bases:
>100_bases GAGGTAGAAAAATGGCTACAGATAATTTTTATTGTGTAAATGGAAACACAAGCGTAAAAGATATAATTAAAAACTTAACA AAAGAAATAACACAAAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKDLLPSVQYEGLKKKIDTFIYRKIEGIQKVKG ILLDIPAIQNNYTEQFKFDKDVYITGLHFNQTGWKKEDRFSLEVNKIKIIDNATTKEIGEHKYFNTFYKVNANTPISFIF HNLSGNSRQTMVDLEYIDGEDSSITPGIEDIDNEWDIAVVMNWEENTDADIDLYGEIGDKEVWYGNKSYDGFYLNFDYTT HKTNKNPEIISVKGYKNKKLNIYVHNYNARELKEPVALEIYQNRSYGNKLLKKISVNLEADDSYIKGVFTIDLNTLKITK LNKNKKKY
Sequences:
>Translated_328_residues MSLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKDLLPSVQYEGLKKKIDTFIYRKIEGIQKVKG ILLDIPAIQNNYTEQFKFDKDVYITGLHFNQTGWKKEDRFSLEVNKIKIIDNATTKEIGEHKYFNTFYKVNANTPISFIF HNLSGNSRQTMVDLEYIDGEDSSITPGIEDIDNEWDIAVVMNWEENTDADIDLYGEIGDKEVWYGNKSYDGFYLNFDYTT HKTNKNPEIISVKGYKNKKLNIYVHNYNARELKEPVALEIYQNRSYGNKLLKKISVNLEADDSYIKGVFTIDLNTLKITK LNKNKKKY >Mature_327_residues SLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKDLLPSVQYEGLKKKIDTFIYRKIEGIQKVKGI LLDIPAIQNNYTEQFKFDKDVYITGLHFNQTGWKKEDRFSLEVNKIKIIDNATTKEIGEHKYFNTFYKVNANTPISFIFH NLSGNSRQTMVDLEYIDGEDSSITPGIEDIDNEWDIAVVMNWEENTDADIDLYGEIGDKEVWYGNKSYDGFYLNFDYTTH KTNKNPEIISVKGYKNKKLNIYVHNYNARELKEPVALEIYQNRSYGNKLLKKISVNLEADDSYIKGVFTIDLNTLKITKL NKNKKKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38381; Mature: 38250
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKDLLPSVQYEGL CCCCHHEECHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH KKKIDTFIYRKIEGIQKVKGILLDIPAIQNNYTEQFKFDKDVYITGLHFNQTGWKKEDRF HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHEECCCCEEEEEEEECCCCCCCCCCE SLEVNKIKIIDNATTKEIGEHKYFNTFYKVNANTPISFIFHNLSGNSRQTMVDLEYIDGE EEEEEEEEEEECCCHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCC DSSITPGIEDIDNEWDIAVVMNWEENTDADIDLYGEIGDKEVWYGNKSYDGFYLNFDYTT CCCCCCCHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEEEEE HKTNKNPEIISVKGYKNKKLNIYVHNYNARELKEPVALEIYQNRSYGNKLLKKISVNLEA CCCCCCCCEEEEECCCCCEEEEEEECCCHHHHCCCEEEEEEECCCHHHHHHHHHEEEEEC DDSYIKGVFTIDLNTLKITKLNKNKKKY CCCEEEEEEEEEECEEEEEEECCCCCCC >Mature Secondary Structure SLPKYIINFEELTEDLKNHLLSLIDDNIRTNYPEINTNNIQDLLQQLKDLLPSVQYEGL CCCHHEECHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH KKKIDTFIYRKIEGIQKVKGILLDIPAIQNNYTEQFKFDKDVYITGLHFNQTGWKKEDRF HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHEECCCCEEEEEEEECCCCCCCCCCE SLEVNKIKIIDNATTKEIGEHKYFNTFYKVNANTPISFIFHNLSGNSRQTMVDLEYIDGE EEEEEEEEEEECCCHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCC DSSITPGIEDIDNEWDIAVVMNWEENTDADIDLYGEIGDKEVWYGNKSYDGFYLNFDYTT CCCCCCCHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEEEEE HKTNKNPEIISVKGYKNKKLNIYVHNYNARELKEPVALEIYQNRSYGNKLLKKISVNLEA CCCCCCCCEEEEECCCCCEEEEEEECCCHHHHCCCEEEEEEECCCHHHHHHHHHEEEEEC DDSYIKGVFTIDLNTLKITKLNKNKKKY CCCEEEEEEEEEECEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA