| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yrrM [H]
Identifier: 170754291
GI number: 170754291
Start: 2724672
End: 2725328
Strand: Reverse
Name: yrrM [H]
Synonym: CLD_2009
Alternate gene names: 170754291
Gene position: 2725328-2724672 (Counterclockwise)
Preceding gene: 170755981
Following gene: 170757811
Centisome position: 68.85
GC content: 26.48
Gene sequence:
>657_bases ATGAGTAAAGTAGCCTATGATTATATGGAAGAATATATAAGAGGTCTTATACCAGAAAATGAAGGTGTATTAAAGGAATT AGAAGACTATGCTAAAGAAAATGCTGTTCCAATAGTACATAAAGAGGTAGCTAATTTTTTAGAATTTATGATAAGTGTAA AAAAACCTAAAAAAATACTTGAGTTAGGTACAGCCATAGGATACTCTTCAATATTTATGAGCTTAAGTTCAAAGGGAGAA TGCAATATTACTACCATTGAACGTGATGATAAAATGATAGAAATTGCTAAAGATAATATTGAAAAATATAGCTTTAAAGA TAAAATAAAAATTATTCAAGGAGATTGCTTAGAAATCCTTAAAAATTTAGAAGATAAATATGATATGATTTTTATGGATG CAGGAAAAGGACATTATAATGAATTTTTACCTTATTGTTTAAAGCTTTTAAATAAAGATGGAATTATAATAGCAGATAAT GTGCTTTTTAGAGGTATGGTTGCTAATGATGAATTAGTTATAAGAAGAAAGATAACTATAGTTAAAAGAATGAGAAAATA TATGAATATGATAAGTGATAAGGATAATTTCATAACTTCAATTATACCTATGGGAGACGGAATTGCTATAACTAAGAGGA GGAATGAGTATGCTTAA
Upstream 100 bases:
>100_bases GAAACTCAAGGAGATTAATATATTTTGCTGCAGGTGACCTACAATATTTTAAAATTAAAAGGTCACCTTGTGTATTATTA GTTTTAAATTGGAGGTAAAT
Downstream 100 bases:
>100_bases TATGAAAAAACCAGAACTTTTAGCTCCAGCAGGGAATTTAGAAAAATTAAAGACAGCTATAAACTTTGGAGCAGATGCGG TTTATTTAGGTGGTAGCAGA
Product: O-methyltransferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSKVAYDYMEEYIRGLIPENEGVLKELEDYAKENAVPIVHKEVANFLEFMISVKKPKKILELGTAIGYSSIFMSLSSKGE CNITTIERDDKMIEIAKDNIEKYSFKDKIKIIQGDCLEILKNLEDKYDMIFMDAGKGHYNEFLPYCLKLLNKDGIIIADN VLFRGMVANDELVIRRKITIVKRMRKYMNMISDKDNFITSIIPMGDGIAITKRRNEYA
Sequences:
>Translated_218_residues MSKVAYDYMEEYIRGLIPENEGVLKELEDYAKENAVPIVHKEVANFLEFMISVKKPKKILELGTAIGYSSIFMSLSSKGE CNITTIERDDKMIEIAKDNIEKYSFKDKIKIIQGDCLEILKNLEDKYDMIFMDAGKGHYNEFLPYCLKLLNKDGIIIADN VLFRGMVANDELVIRRKITIVKRMRKYMNMISDKDNFITSIIPMGDGIAITKRRNEYA >Mature_217_residues SKVAYDYMEEYIRGLIPENEGVLKELEDYAKENAVPIVHKEVANFLEFMISVKKPKKILELGTAIGYSSIFMSLSSKGEC NITTIERDDKMIEIAKDNIEKYSFKDKIKIIQGDCLEILKNLEDKYDMIFMDAGKGHYNEFLPYCLKLLNKDGIIIADNV LFRGMVANDELVIRRKITIVKRMRKYMNMISDKDNFITSIIPMGDGIAITKRRNEYA
Specific function: Unknown
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002935 [H]
Pfam domain/function: PF01596 Methyltransf_3 [H]
EC number: NA
Molecular weight: Translated: 25178; Mature: 25047
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVAYDYMEEYIRGLIPENEGVLKELEDYAKENAVPIVHKEVANFLEFMISVKKPKKIL CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH ELGTAIGYSSIFMSLSSKGECNITTIERDDKMIEIAKDNIEKYSFKDKIKIIQGDCLEIL HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCHHHHHHEEHHHHHHHH KNLEDKYDMIFMDAGKGHYNEFLPYCLKLLNKDGIIIADNVLFRGMVANDELVIRRKITI HHCCCHHCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCHHHEEEECCCCEEHHHHHHH VKRMRKYMNMISDKDNFITSIIPMGDGIAITKRRNEYA HHHHHHHHHHHCCCCCHHHHEEECCCCEEEECCCCCCC >Mature Secondary Structure SKVAYDYMEEYIRGLIPENEGVLKELEDYAKENAVPIVHKEVANFLEFMISVKKPKKIL CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH ELGTAIGYSSIFMSLSSKGECNITTIERDDKMIEIAKDNIEKYSFKDKIKIIQGDCLEIL HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCHHHHHHEEHHHHHHHH KNLEDKYDMIFMDAGKGHYNEFLPYCLKLLNKDGIIIADNVLFRGMVANDELVIRRKITI HHCCCHHCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCHHHEEEECCCCEEHHHHHHH VKRMRKYMNMISDKDNFITSIIPMGDGIAITKRRNEYA HHHHHHHHHHHCCCCCHHHHEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]