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The map label for this gene is yrrO [H]

Identifier: 170757811

GI number: 170757811

Start: 2723453

End: 2724679

Strand: Reverse

Name: yrrO [H]

Synonym: CLD_2010

Alternate gene names: 170757811

Gene position: 2724679-2723453 (Counterclockwise)

Preceding gene: 170754291

Following gene: 170756729

Centisome position: 68.84

GC content: 29.83

Gene sequence:

>1227_bases
ATGCTTAATATGAAAAAACCAGAACTTTTAGCTCCAGCAGGGAATTTAGAAAAATTAAAGACAGCTATAAACTTTGGAGC
AGATGCGGTTTATTTAGGTGGTAGCAGATTAAATTTAAGAGCATTTGCGGACAATTTCACAGATGATGAGCTTCAAGAGG
GTATAAAATATGCTCATGATAGAGGTAGAAAGGTTCATGTTACGATAAATGTTTTCCCACGTAATGAAGATTTTGATGGA
TTAGAAGAGTATTTGAAAAAATTATATGAATTTAATGTAGATGCCATAATAGTTTCAGATCCAGGAATTATTATGACTGC
AAGGGAAACAGTACCCAATTTGGAGATACATTTAAGCACTCAAGCAAATACAGTTAATTTTAAAACTATAAACTTTTGGT
ATAAACAAGGTGTTAAAAGAACTGTATTAGCAAGAGAATTAACTTTAGAAGAAATAAAAACCATAAGAGAAAAAATAGAA
AAAGATTGTGAATTAGAAGCCTTTGTTCATGGTTCTATGTGCATGTCTTATTCTGGTAGATGCCTTCTATCTAACTATAT
GACAGGAAGAGATTCTAATAGAGGAGCTTGTGCACAACCTTGTAGATATAAATATTATTTAATGGAAGAAAAAAGAGAAG
GGGAGTATTTCCCGATTTTAGAAGATGATAAAGGAACATACATAATGAATTCAAAGGATATGTGTATGATAGAGCATATA
CCAGAGTTAGTTCAAAGTGGCATAGATTCCTTTAAAATAGAAGGAAGAATGAAAAGTTCTTTCTATGTGGCTACAGTAGT
TAAAGCCTATAGAGAAGCTATAGACGCTTATTTTGAGGACCCAGAAAATTATACTTTTAAAGAAAGATGGATGGATTATT
TAAAAAAGGCTAGTCATAGAGCATATTTTACAGGTTTTTATTTTAATGATCCTAATAAGCAATTACATGAATCTTCTTCA
TATATTAGAACTTGTGATATTGTAGGTATTGTGAAAAAATTTAACGAAGAAACTATGGAAGCTATAGTAGAGCAAAGAAA
TAAAGTACTAGATGGAGATGAATTAGAAGTTTTAAGACCTGAAGGTCCTATATTTAAAATAAATATAATCAACATGAGAG
ACAAAAATGATAAAAAAATAGATTCTGCTCCTTCAGCCCAAATGATATTTAAAGTTAACACAGATAAAAGCTTAAAAGAA
AATGATATACTTATAAAAAATAAATAA

Upstream 100 bases:

>100_bases
ATGAGAAAATATATGAATATGATAAGTGATAAGGATAATTTCATAACTTCAATTATACCTATGGGAGACGGAATTGCTAT
AACTAAGAGGAGGAATGAGT

Downstream 100 bases:

>100_bases
TATATAAAAACATATATATATTAGTGTGAAAAAAGAAAATTAGCCAAGAATATACTATTAATTTGTTATAATTTTAAATT
TTATTATACATAAAATGATT

Product: U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MLNMKKPELLAPAGNLEKLKTAINFGADAVYLGGSRLNLRAFADNFTDDELQEGIKYAHDRGRKVHVTINVFPRNEDFDG
LEEYLKKLYEFNVDAIIVSDPGIIMTARETVPNLEIHLSTQANTVNFKTINFWYKQGVKRTVLARELTLEEIKTIREKIE
KDCELEAFVHGSMCMSYSGRCLLSNYMTGRDSNRGACAQPCRYKYYLMEEKREGEYFPILEDDKGTYIMNSKDMCMIEHI
PELVQSGIDSFKIEGRMKSSFYVATVVKAYREAIDAYFEDPENYTFKERWMDYLKKASHRAYFTGFYFNDPNKQLHESSS
YIRTCDIVGIVKKFNEETMEAIVEQRNKVLDGDELEVLRPEGPIFKINIINMRDKNDKKIDSAPSAQMIFKVNTDKSLKE
NDILIKNK

Sequences:

>Translated_408_residues
MLNMKKPELLAPAGNLEKLKTAINFGADAVYLGGSRLNLRAFADNFTDDELQEGIKYAHDRGRKVHVTINVFPRNEDFDG
LEEYLKKLYEFNVDAIIVSDPGIIMTARETVPNLEIHLSTQANTVNFKTINFWYKQGVKRTVLARELTLEEIKTIREKIE
KDCELEAFVHGSMCMSYSGRCLLSNYMTGRDSNRGACAQPCRYKYYLMEEKREGEYFPILEDDKGTYIMNSKDMCMIEHI
PELVQSGIDSFKIEGRMKSSFYVATVVKAYREAIDAYFEDPENYTFKERWMDYLKKASHRAYFTGFYFNDPNKQLHESSS
YIRTCDIVGIVKKFNEETMEAIVEQRNKVLDGDELEVLRPEGPIFKINIINMRDKNDKKIDSAPSAQMIFKVNTDKSLKE
NDILIKNK
>Mature_408_residues
MLNMKKPELLAPAGNLEKLKTAINFGADAVYLGGSRLNLRAFADNFTDDELQEGIKYAHDRGRKVHVTINVFPRNEDFDG
LEEYLKKLYEFNVDAIIVSDPGIIMTARETVPNLEIHLSTQANTVNFKTINFWYKQGVKRTVLARELTLEEIKTIREKIE
KDCELEAFVHGSMCMSYSGRCLLSNYMTGRDSNRGACAQPCRYKYYLMEEKREGEYFPILEDDKGTYIMNSKDMCMIEHI
PELVQSGIDSFKIEGRMKSSFYVATVVKAYREAIDAYFEDPENYTFKERWMDYLKKASHRAYFTGFYFNDPNKQLHESSS
YIRTCDIVGIVKKFNEETMEAIVEQRNKVLDGDELEVLRPEGPIFKINIINMRDKNDKKIDSAPSAQMIFKVNTDKSLKE
NDILIKNK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=443, Percent_Identity=36.7945823927765, Blast_Score=268, Evalue=5e-73,
Organism=Escherichia coli, GI1789548, Length=320, Percent_Identity=35.625, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI87081910, Length=396, Percent_Identity=31.5656565656566, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 47246; Mature: 47246

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNMKKPELLAPAGNLEKLKTAINFGADAVYLGGSRLNLRAFADNFTDDELQEGIKYAHD
CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHH
RGRKVHVTINVFPRNEDFDGLEEYLKKLYEFNVDAIIVSDPGIIMTARETVPNLEIHLST
CCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEEEEEEC
QANTVNFKTINFWYKQGVKRTVLARELTLEEIKTIREKIEKDCELEAFVHGSMCMSYSGR
CCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCC
CLLSNYMTGRDSNRGACAQPCRYKYYLMEEKREGEYFPILEDDKGTYIMNSKDMCMIEHI
EEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCEEECCCCEEHHHHH
PELVQSGIDSFKIEGRMKSSFYVATVVKAYREAIDAYFEDPENYTFKERWMDYLKKASHR
HHHHHCCCCCEEECCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
AYFTGFYFNDPNKQLHESSSYIRTCDIVGIVKKFNEETMEAIVEQRNKVLDGDELEVLRP
EEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEECC
EGPIFKINIINMRDKNDKKIDSAPSAQMIFKVNTDKSLKENDILIKNK
CCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure
MLNMKKPELLAPAGNLEKLKTAINFGADAVYLGGSRLNLRAFADNFTDDELQEGIKYAHD
CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHH
RGRKVHVTINVFPRNEDFDGLEEYLKKLYEFNVDAIIVSDPGIIMTARETVPNLEIHLST
CCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEEEEEEC
QANTVNFKTINFWYKQGVKRTVLARELTLEEIKTIREKIEKDCELEAFVHGSMCMSYSGR
CCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCC
CLLSNYMTGRDSNRGACAQPCRYKYYLMEEKREGEYFPILEDDKGTYIMNSKDMCMIEHI
EEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCEEECCCCEEHHHHH
PELVQSGIDSFKIEGRMKSSFYVATVVKAYREAIDAYFEDPENYTFKERWMDYLKKASHR
HHHHHCCCCCEEECCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
AYFTGFYFNDPNKQLHESSSYIRTCDIVGIVKKFNEETMEAIVEQRNKVLDGDELEVLRP
EEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEECC
EGPIFKINIINMRDKNDKKIDSAPSAQMIFKVNTDKSLKENDILIKNK
CCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]