| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754212
Identifier: 170754212
GI number: 170754212
Start: 2397081
End: 2397674
Strand: Reverse
Name: 170754212
Synonym: CLD_2373
Alternate gene names: NA
Gene position: 2397674-2397081 (Counterclockwise)
Preceding gene: 170757129
Following gene: 170757356
Centisome position: 60.57
GC content: 29.97
Gene sequence:
>594_bases ATGAAAAACTTGACATTAAGAGATGCAGTAGAGGAGGACGCCCCCATTATCGCTGGTCTTATATATGATACGGAGGATCT TCCGGAGCATATTTGGGGCCAGGGCACTAAAGAGGAAATTTTAAATAGGATTAAGTTATTAGTATTAAGTACTGAATCTA GATACTCTTATTTAAATATAAAAGTAGCAGAGCGAAATGATAAAATATGTGGAGCTATAATTCTTTTGAATAGTGAGGAA ATAGCACAGCTAGATACTAAAACTAGTTTAAAATTGCTTCATATGATTAAAGGCATTAAAGGTAAGATAAAATTTATAAA GGATTTTATAAGAGGAATGTATTTAGAAGAAGGTGGAAAAAGAGAGTTTTACATAGCAAATTTAGCCACTACCAAAGAAG TTAGAGGCCTTGGAATAGGAAAAGAGTTAATGAGATTAGCAGAAAAAATTGCTAAAGAAAAAGGATATAAAGGTTGCTCA CTATTGGCTAAAGATAAAAATGTAAGAAAGTTCTATGAAAAATTAGATTATAAATTTGAAAAAAAGGAAAAGTATTGTTC ACAATATTTATATAGAATGGTTAAAATGGTTTAA
Upstream 100 bases:
>100_bases ACTACCATGTTATGCCTTCACTGTCTTACTTAATCAGCTGAATTCTTATATAATTAGATATATAATTTCGAAAAGAAAAT TTTATGAAAGAGGGATAATT
Downstream 100 bases:
>100_bases ATTATTCCAAAATAAATCTAAACAAAGTGTAAAAGAGCTTATAATGGGCTCTTTTACACTTTGTTTTTATAAATTTTTTA ATTTTACAATATATTAAAAA
Product: acetyltransferase
Products: NA
Alternate protein names: LOW QUALITY PROTEIN Acetyltransferase
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKNLTLRDAVEEDAPIIAGLIYDTEDLPEHIWGQGTKEEILNRIKLLVLSTESRYSYLNIKVAERNDKICGAIILLNSEE IAQLDTKTSLKLLHMIKGIKGKIKFIKDFIRGMYLEEGGKREFYIANLATTKEVRGLGIGKELMRLAEKIAKEKGYKGCS LLAKDKNVRKFYEKLDYKFEKKEKYCSQYLYRMVKMV
Sequences:
>Translated_197_residues MKNLTLRDAVEEDAPIIAGLIYDTEDLPEHIWGQGTKEEILNRIKLLVLSTESRYSYLNIKVAERNDKICGAIILLNSEE IAQLDTKTSLKLLHMIKGIKGKIKFIKDFIRGMYLEEGGKREFYIANLATTKEVRGLGIGKELMRLAEKIAKEKGYKGCS LLAKDKNVRKFYEKLDYKFEKKEKYCSQYLYRMVKMV >Mature_197_residues MKNLTLRDAVEEDAPIIAGLIYDTEDLPEHIWGQGTKEEILNRIKLLVLSTESRYSYLNIKVAERNDKICGAIILLNSEE IAQLDTKTSLKLLHMIKGIKGKIKFIKDFIRGMYLEEGGKREFYIANLATTKEVRGLGIGKELMRLAEKIAKEKGYKGCS LLAKDKNVRKFYEKLDYKFEKKEKYCSQYLYRMVKMV
Specific function: Unknown
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22811; Mature: 22811
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLTLRDAVEEDAPIIAGLIYDTEDLPEHIWGQGTKEEILNRIKLLVLSTESRYSYLNI CCCCCHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHEEECCCCEEEEEE KVAERNDKICGAIILLNSEEIAQLDTKTSLKLLHMIKGIKGKIKFIKDFIRGMYLEEGGK EEECCCCCEEEEEEEECCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC REFYIANLATTKEVRGLGIGKELMRLAEKIAKEKGYKGCSLLAKDKNVRKFYEKLDYKFE EEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCHH KKEKYCSQYLYRMVKMV HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNLTLRDAVEEDAPIIAGLIYDTEDLPEHIWGQGTKEEILNRIKLLVLSTESRYSYLNI CCCCCHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHEEECCCCEEEEEE KVAERNDKICGAIILLNSEEIAQLDTKTSLKLLHMIKGIKGKIKFIKDFIRGMYLEEGGK EEECCCCCEEEEEEEECCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC REFYIANLATTKEVRGLGIGKELMRLAEKIAKEKGYKGCSLLAKDKNVRKFYEKLDYKFE EEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCHH KKEKYCSQYLYRMVKMV HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA