| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is gntP
Identifier: 170757129
GI number: 170757129
Start: 2398599
End: 2399987
Strand: Reverse
Name: gntP
Synonym: CLD_2371
Alternate gene names: 170757129
Gene position: 2399987-2398599 (Counterclockwise)
Preceding gene: 170757705
Following gene: 170754212
Centisome position: 60.63
GC content: 33.48
Gene sequence:
>1389_bases ATGGGAAACACAGTAGCAGGAAATCAAATGATATTAGGACTTGTAGTTGGAATTAGCATACTTGTATTCTTAATATTAAA AACAAAAATTCACACATTCTTAGCACTAATTATCTCGGCAGCTACTACTGGGCTTGTAGGAGGAATGCCACCTAATAAAA TAATTGATTCAATATCTAAAGGTTTTGGGGGAACTTTAGGAAGCATTGGTATAATCATAGGTTTTGGAGTAATGATGGGC CAGATTTTTGAAGTATCTGGTGCAGCTGAAAGGATGGCTAGAACTTTTATAAAGTTTTTAGGTAAAAAAAGAGAAGAATT AGCATTAGCAATAACAGGGTTTATAGTGTCTATACCTATATTTTGTGATTCAGGATTTATAATTCTAGCACCGCTTGCAA AAGCAATTTCTAAGAAAACTAAAAAATCGGTAGTTTCTTTAGGAGTAGCTTTAGGATTAGGGCTTGTAATTACTCATAGT TTAGTACCACCAACACCTGGTCCTGTAGGGGTTGCAGGTATATTCGGAGTAAGTGTAGGAAAATTTATTTTATGGGGAAT TCCTTTAGCTATACCTATGGTGATAGCTGGTATGTTTTATGGAAAGTATATAGGGAAAAAAATATATCAAATTCCAGGAG ATGAAGAAGATCAGTGGATTAGAACAGAATATCAAGAGCCAGTATATGATTTTGAACATGAAGAGGATAATAAAGAACTA CCATCTACATTTATGGCTTTTGCACCAATAATGACACCAATAATATTTATACTTATAAACACTATACTAGATGTTTTAAT CAAACAAAAGACAATAACTCCTAGTGGATTTACTAATATGATTCAATTCTTAGGTTCTCCAATAATTGCAGTAGGAATCG GTCTTATAATAGCCATATATGGACTAGCAGGTAAGCTAAATAAAGAAGAAGTTATAAATGAAATGGAAAAAGGAATAAAA TCTGCAGGTATAATAATATTAGTTACTGGTGGCGGTGGAGCTTTAGGTATGGTACTTCGTGATAGTGGTACAGGAGATTA TATAGCAAAATCAATTGCAGGATCTCATATGCCAGTTGTGTTAATACCATTTATAATAGCATCTTTAGTAAGACTTATCC AAGGAAGTGGAACAGTTGCTATGATAACTGCGGCTTCTATAACAGCACCAATTGTTGCAGCATCAAATGTTAATCCAATA TTAGCAGCCCTTGGAGCATGTATGGGATCACTTTTATTCTCATATTTCAATGATAGTTATTTCTGGGTAGTTAACCGCTC CCTTGGAATAAAAGATGCAAAAGAACAAATAAAAGTATGGTCAGTTACTACTACTATAGCTTGGGCAGTAGGCTTAGTAG AACTAATTATATTAAGTTTTATACTATAA
Upstream 100 bases:
>100_bases TTAATATTTATAAAGAAGAACTCATATTACATATAAAAAAATTTCACTAGTTTTTTTTATTACAAATGAATACCTTTACA AAACAAAAGGAGGAAGAATA
Downstream 100 bases:
>100_bases AATGTAAACCAATTCAGCTGGAGTTTTTACTTCAGCTGAATTTTACTTTAATAAAATTAGGCTATGTTTTAGAATAATGC TGATAATATATCAATTTTTA
Product: gluconate permease
Products: gluconate [Cytoplasm]; L-idonate [Cytoplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MGNTVAGNQMILGLVVGISILVFLILKTKIHTFLALIISAATTGLVGGMPPNKIIDSISKGFGGTLGSIGIIIGFGVMMG QIFEVSGAAERMARTFIKFLGKKREELALAITGFIVSIPIFCDSGFIILAPLAKAISKKTKKSVVSLGVALGLGLVITHS LVPPTPGPVGVAGIFGVSVGKFILWGIPLAIPMVIAGMFYGKYIGKKIYQIPGDEEDQWIRTEYQEPVYDFEHEEDNKEL PSTFMAFAPIMTPIIFILINTILDVLIKQKTITPSGFTNMIQFLGSPIIAVGIGLIIAIYGLAGKLNKEEVINEMEKGIK SAGIIILVTGGGGALGMVLRDSGTGDYIAKSIAGSHMPVVLIPFIIASLVRLIQGSGTVAMITAASITAPIVAASNVNPI LAALGACMGSLLFSYFNDSYFWVVNRSLGIKDAKEQIKVWSVTTTIAWAVGLVELIILSFIL
Sequences:
>Translated_462_residues MGNTVAGNQMILGLVVGISILVFLILKTKIHTFLALIISAATTGLVGGMPPNKIIDSISKGFGGTLGSIGIIIGFGVMMG QIFEVSGAAERMARTFIKFLGKKREELALAITGFIVSIPIFCDSGFIILAPLAKAISKKTKKSVVSLGVALGLGLVITHS LVPPTPGPVGVAGIFGVSVGKFILWGIPLAIPMVIAGMFYGKYIGKKIYQIPGDEEDQWIRTEYQEPVYDFEHEEDNKEL PSTFMAFAPIMTPIIFILINTILDVLIKQKTITPSGFTNMIQFLGSPIIAVGIGLIIAIYGLAGKLNKEEVINEMEKGIK SAGIIILVTGGGGALGMVLRDSGTGDYIAKSIAGSHMPVVLIPFIIASLVRLIQGSGTVAMITAASITAPIVAASNVNPI LAALGACMGSLLFSYFNDSYFWVVNRSLGIKDAKEQIKVWSVTTTIAWAVGLVELIILSFIL >Mature_461_residues GNTVAGNQMILGLVVGISILVFLILKTKIHTFLALIISAATTGLVGGMPPNKIIDSISKGFGGTLGSIGIIIGFGVMMGQ IFEVSGAAERMARTFIKFLGKKREELALAITGFIVSIPIFCDSGFIILAPLAKAISKKTKKSVVSLGVALGLGLVITHSL VPPTPGPVGVAGIFGVSVGKFILWGIPLAIPMVIAGMFYGKYIGKKIYQIPGDEEDQWIRTEYQEPVYDFEHEEDNKELP STFMAFAPIMTPIIFILINTILDVLIKQKTITPSGFTNMIQFLGSPIIAVGIGLIIAIYGLAGKLNKEEVINEMEKGIKS AGIIILVTGGGGALGMVLRDSGTGDYIAKSIAGSHMPVVLIPFIIASLVRLIQGSGTVAMITAASITAPIVAASNVNPIL AALGACMGSLLFSYFNDSYFWVVNRSLGIKDAKEQIKVWSVTTTIAWAVGLVELIILSFIL
Specific function: Transport Of Gluconate And L-Idonate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=450, Percent_Identity=33.3333333333333, Blast_Score=229, Evalue=2e-61, Organism=Escherichia coli, GI1790716, Length=450, Percent_Identity=31.7777777777778, Blast_Score=225, Evalue=4e-60, Organism=Escherichia coli, GI1789097, Length=435, Percent_Identity=33.7931034482759, Blast_Score=215, Evalue=6e-57, Organism=Escherichia coli, GI1788707, Length=458, Percent_Identity=30.7860262008734, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI48994939, Length=449, Percent_Identity=31.4031180400891, Blast_Score=206, Evalue=3e-54, Organism=Escherichia coli, GI2367370, Length=453, Percent_Identity=33.112582781457, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1790776, Length=460, Percent_Identity=30.2173913043478, Blast_Score=196, Evalue=3e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 48889; Mature: 48758
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNTVAGNQMILGLVVGISILVFLILKTKIHTFLALIISAATTGLVGGMPPNKIIDSISK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GFGGTLGSIGIIIGFGVMMGQIFEVSGAAERMARTFIKFLGKKREELALAITGFIVSIPI HCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FCDSGFIILAPLAKAISKKTKKSVVSLGVALGLGLVITHSLVPPTPGPVGVAGIFGVSVG EECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH KFILWGIPLAIPMVIAGMFYGKYIGKKIYQIPGDEEDQWIRTEYQEPVYDFEHEEDNKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHH PSTFMAFAPIMTPIIFILINTILDVLIKQKTITPSGFTNMIQFLGSPIIAVGIGLIIAIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH GLAGKLNKEEVINEMEKGIKSAGIIILVTGGGGALGMVLRDSGTGDYIAKSIAGSHMPVV HHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCHH LIPFIIASLVRLIQGSGTVAMITAASITAPIVAASNVNPILAALGACMGSLLFSYFNDSY HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCE FWVVNRSLGIKDAKEQIKVWSVTTTIAWAVGLVELIILSFIL EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GNTVAGNQMILGLVVGISILVFLILKTKIHTFLALIISAATTGLVGGMPPNKIIDSISK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GFGGTLGSIGIIIGFGVMMGQIFEVSGAAERMARTFIKFLGKKREELALAITGFIVSIPI HCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FCDSGFIILAPLAKAISKKTKKSVVSLGVALGLGLVITHSLVPPTPGPVGVAGIFGVSVG EECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH KFILWGIPLAIPMVIAGMFYGKYIGKKIYQIPGDEEDQWIRTEYQEPVYDFEHEEDNKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHH PSTFMAFAPIMTPIIFILINTILDVLIKQKTITPSGFTNMIQFLGSPIIAVGIGLIIAIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH GLAGKLNKEEVINEMEKGIKSAGIIILVTGGGGALGMVLRDSGTGDYIAKSIAGSHMPVV HHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCHH LIPFIIASLVRLIQGSGTVAMITAASITAPIVAASNVNPILAALGACMGSLLFSYFNDSY HHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCE FWVVNRSLGIKDAKEQIKVWSVTTTIAWAVGLVELIILSFIL EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: gluconate [Periplasm]; Proton [Periplasm]; L-idonate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] Proton [Periplasm] + L-idonate [Periplasm] = L-idonate [Cytoplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]