| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yxeI [H]
Identifier: 170757356
GI number: 170757356
Start: 2395825
End: 2396814
Strand: Reverse
Name: yxeI [H]
Synonym: CLD_2374
Alternate gene names: 170757356
Gene position: 2396814-2395825 (Counterclockwise)
Preceding gene: 170754212
Following gene: 170756319
Centisome position: 60.55
GC content: 29.39
Gene sequence:
>990_bases ATGTGTACTAGTGTAACTTTAAAAACAAAAGATGGTAAAAATTTGTTTGGACGTACAATGGATTTTTCGGTGAAGTTTAA TGAATCTGTTCGTTTAGTTCCTAGAAATTTCAAATGGACTAATGTAACAGATAAAGAGGAAAAAAGTACAAAATATGCTT TTATTGGTATGTCTATAGTAACAGACAATCATCCCGTTTTTGGAGATGGTGTAAATGAAAAAGGGTTAACCTGTGCTACC CTTTATTTTCCTGGCTTTGCAAAGTATGAAGAGGAAAATATTGAAAACAAAGAAAATATAGCTTGTTATGATTTTGTATT ATGGGCACTATCTCAATTTAAACATTTAGAGGAAGTAAAAAAATCATTGGAAAATGTAGTAGTTATTAATAAAGTATTGT CTATATTAAATTTTGCTCCACCATTGCATTGGATTTTATCTGATAAATCTGGTAAAAGTATAGTTGTAGAAAAAACAAAT AGAGGATTAGAGGTATTTGATAATCCAATTGGTGTTATGACAAATAGTCCTAATTTTGAATGGCATTTAAGTAATTTACG TCAATATATTGGAGTGAGAGCTAAACAATTTGATAATGTTACATGGAATGGTTTAGAGTTATCTGCTTTTAGCCAAGGGT CTGGAACTTTTGGATTACCAGGAGATTTTACTCCACCCTCTCGCTTTGTTAGGGCAGTTTATTTAAAAAATAATATTGTG GATATTGATGATGAAATTGAAGGAGTAAATGGTATATTTCATATATTATCTAATTGTGAAATTCCCAAAGGAACGGTTTT AAAATCTGATAATGCTTGTGATTATACGTTGTACACTTCTGCAATGTGCAGTGAATCAGCTACATATTACTATCATACTT ATGAAGATTGTCAAATTTCAGTTGTTCATTTATTTAATGAAAATTTGGATGCTCCTTTTATGAAAAACTTTCCAATTAGT AAAGTGCAATCAATTAATAACATAAATTAA
Upstream 100 bases:
>100_bases TGTAAAAATAATATTTAAAAGGATAATCGCATGTTATTTTTTTACAAAAACTAGCTAATGTATTAGTAATACATTGGAGT TGAAAGGACGTGTTTAATCT
Downstream 100 bases:
>100_bases TAACATAAAAGACTATCTTAAATTAAATTTTGAGATAGTTTTTTATAGTGTAGCCAGTAGAGGTACAACAACTTGGTGGT GAAAGAAGGTTATTCTATAA
Product: linear amide C-N hydrolase
Products: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanate; glycine
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MCTSVTLKTKDGKNLFGRTMDFSVKFNESVRLVPRNFKWTNVTDKEEKSTKYAFIGMSIVTDNHPVFGDGVNEKGLTCAT LYFPGFAKYEEENIENKENIACYDFVLWALSQFKHLEEVKKSLENVVVINKVLSILNFAPPLHWILSDKSGKSIVVEKTN RGLEVFDNPIGVMTNSPNFEWHLSNLRQYIGVRAKQFDNVTWNGLELSAFSQGSGTFGLPGDFTPPSRFVRAVYLKNNIV DIDDEIEGVNGIFHILSNCEIPKGTVLKSDNACDYTLYTSAMCSESATYYYHTYEDCQISVVHLFNENLDAPFMKNFPIS KVQSINNIN
Sequences:
>Translated_329_residues MCTSVTLKTKDGKNLFGRTMDFSVKFNESVRLVPRNFKWTNVTDKEEKSTKYAFIGMSIVTDNHPVFGDGVNEKGLTCAT LYFPGFAKYEEENIENKENIACYDFVLWALSQFKHLEEVKKSLENVVVINKVLSILNFAPPLHWILSDKSGKSIVVEKTN RGLEVFDNPIGVMTNSPNFEWHLSNLRQYIGVRAKQFDNVTWNGLELSAFSQGSGTFGLPGDFTPPSRFVRAVYLKNNIV DIDDEIEGVNGIFHILSNCEIPKGTVLKSDNACDYTLYTSAMCSESATYYYHTYEDCQISVVHLFNENLDAPFMKNFPIS KVQSINNIN >Mature_329_residues MCTSVTLKTKDGKNLFGRTMDFSVKFNESVRLVPRNFKWTNVTDKEEKSTKYAFIGMSIVTDNHPVFGDGVNEKGLTCAT LYFPGFAKYEEENIENKENIACYDFVLWALSQFKHLEEVKKSLENVVVINKVLSILNFAPPLHWILSDKSGKSIVVEKTN RGLEVFDNPIGVMTNSPNFEWHLSNLRQYIGVRAKQFDNVTWNGLELSAFSQGSGTFGLPGDFTPPSRFVRAVYLKNNIV DIDDEIEGVNGIFHILSNCEIPKGTVLKSDNACDYTLYTSAMCSESATYYYHTYEDCQISVVHLFNENLDAPFMKNFPIS KVQSINNIN
Specific function: Unknown
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: 3.5.1.24
Molecular weight: Translated: 37267; Mature: 37267
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTSVTLKTKDGKNLFGRTMDFSVKFNESVRLVPRNFKWTNVTDKEEKSTKYAFIGMSIV CCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEECCCEECCCCCCCCCCCEEEEEEEEEE TDNHPVFGDGVNEKGLTCATLYFPGFAKYEEENIENKENIACYDFVLWALSQFKHLEEVK ECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KSLENVVVINKVLSILNFAPPLHWILSDKSGKSIVVEKTNRGLEVFDNPIGVMTNSPNFE HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEECCCEEEEECCCCCE WHLSNLRQYIGVRAKQFDNVTWNGLELSAFSQGSGTFGLPGDFTPPSRFVRAVYLKNNIV EEHHHHHHHHCCHHHHCCCCEECCEEEEEECCCCCCCCCCCCCCCHHHHHEEEEEECCEE DIDDEIEGVNGIFHILSNCEIPKGTVLKSDNACDYTLYTSAMCSESATYYYHTYEDCQIS ECCCHHCHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEHHHHCCCCEEEEEEECCCEEE VVHLFNENLDAPFMKNFPISKVQSINNIN EEEEECCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MCTSVTLKTKDGKNLFGRTMDFSVKFNESVRLVPRNFKWTNVTDKEEKSTKYAFIGMSIV CCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEECCCEECCCCCCCCCCCEEEEEEEEEE TDNHPVFGDGVNEKGLTCATLYFPGFAKYEEENIENKENIACYDFVLWALSQFKHLEEVK ECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KSLENVVVINKVLSILNFAPPLHWILSDKSGKSIVVEKTNRGLEVFDNPIGVMTNSPNFE HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEECCCEEEEECCCCCE WHLSNLRQYIGVRAKQFDNVTWNGLELSAFSQGSGTFGLPGDFTPPSRFVRAVYLKNNIV EEHHHHHHHHCCHHHHCCCCEECCEEEEEECCCCCCCCCCCCCCCHHHHHEEEEEECCEE DIDDEIEGVNGIFHILSNCEIPKGTVLKSDNACDYTLYTSAMCSESATYYYHTYEDCQIS ECCCHHCHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEHHHHCCCCEEEEEEECCCEEE VVHLFNENLDAPFMKNFPISKVQSINNIN EEEEECCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholan-24-oylglycine; H2O
Specific reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholan-24-oylglycine + H2O = 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanate + glycine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]