| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751816
Identifier: 170751816
GI number: 170751816
Start: 5755983
End: 5756573
Strand: Reverse
Name: 170751816
Synonym: Mrad2831_5446
Alternate gene names: NA
Gene position: 5756573-5755983 (Counterclockwise)
Preceding gene: 170751817
Following gene: 170751814
Centisome position: 94.71
GC content: 73.94
Gene sequence:
>591_bases ATGCGCCGCCATCTCCGTTTGATCCGCGGGCTGGTCTATGCCCTCGGCGGGCTGCTGCTCACGGGCGCGACGCGCGCCGC CCCGGACGCGGCGATGCAGGAGCGCCTCGCTCCCTGCATCGGCTGCCACGGGGCCGGCACGTCGGCGACGGAGGGCGTGC CTTCGCTCGGCGGGCAGCTCCCGGACTACGTGGTCACGCAGCTCTTCCAGTTCCGGGAGAAGCAGCGGGAGGCGCCGCCG ATGAACGAGGTGGCCGCCGGATTCTCCGACGACGACCTGCGCGGCTACGCCGACGCGGTGGCGACGCTGCCGCCGCCCGC CTGGGCCGGGCCACCGGCCGACGCGGCTCTGGCGGCGCGCGCGCAGGCGCTCGTCGCCAAGCACCAGTGCAATTCCTGCC ACGGACCGGACCTCGCGGGCCGCGACGCGATCCCGCGGATCCGCGCGCAGCGGGAGGATTACCTCGCCAAGGCGCTCGCC GCCTACAAGTCGAACGCCCGGCCCGGCTACGATCCCGCCATGAACGAGGTCGCGCAGGGCCTGAGCGAGGCGGACATCAA GGATCTCGCGGCCTACGTGTCGCGGCTCTGA
Upstream 100 bases:
>100_bases ATGTCGGCCGGCCGGTCGACGTGCTGGTCGCCAAGGACGGATCGCTGCTCGTTTCCGACGACTACAACGGCGCGATCTAC CGCGTCAGCTACGGCCGGTG
Downstream 100 bases:
>100_bases CACGACCTCCCTCTGACCGCGACGACGGCAGCACCGGAGGGAAGAGTTAGCTCGTCACCCCACCACGCGCAGCGCGTCAC CCTTCGCCAGCGTCCCGCCG
Product: putative cytochrome c4
Products: NA
Alternate protein names: Cytochrome C; Cytochrome; Cytochrome C Family Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MRRHLRLIRGLVYALGGLLLTGATRAAPDAAMQERLAPCIGCHGAGTSATEGVPSLGGQLPDYVVTQLFQFREKQREAPP MNEVAAGFSDDDLRGYADAVATLPPPAWAGPPADAALAARAQALVAKHQCNSCHGPDLAGRDAIPRIRAQREDYLAKALA AYKSNARPGYDPAMNEVAQGLSEADIKDLAAYVSRL
Sequences:
>Translated_196_residues MRRHLRLIRGLVYALGGLLLTGATRAAPDAAMQERLAPCIGCHGAGTSATEGVPSLGGQLPDYVVTQLFQFREKQREAPP MNEVAAGFSDDDLRGYADAVATLPPPAWAGPPADAALAARAQALVAKHQCNSCHGPDLAGRDAIPRIRAQREDYLAKALA AYKSNARPGYDPAMNEVAQGLSEADIKDLAAYVSRL >Mature_196_residues MRRHLRLIRGLVYALGGLLLTGATRAAPDAAMQERLAPCIGCHGAGTSATEGVPSLGGQLPDYVVTQLFQFREKQREAPP MNEVAAGFSDDDLRGYADAVATLPPPAWAGPPADAALAARAQALVAKHQCNSCHGPDLAGRDAIPRIRAQREDYLAKALA AYKSNARPGYDPAMNEVAQGLSEADIKDLAAYVSRL
Specific function: Unknown
COG id: COG2863
COG function: function code C; Cytochrome c553
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20731; Mature: 20731
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS51007 CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRHLRLIRGLVYALGGLLLTGATRAAPDAAMQERLAPCIGCHGAGTSATEGVPSLGGQL CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC PDYVVTQLFQFREKQREAPPMNEVAAGFSDDDLRGYADAVATLPPPAWAGPPADAALAAR HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AQALVAKHQCNSCHGPDLAGRDAIPRIRAQREDYLAKALAAYKSNARPGYDPAMNEVAQG HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC LSEADIKDLAAYVSRL HHHHHHHHHHHHHHCC >Mature Secondary Structure MRRHLRLIRGLVYALGGLLLTGATRAAPDAAMQERLAPCIGCHGAGTSATEGVPSLGGQL CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC PDYVVTQLFQFREKQREAPPMNEVAAGFSDDDLRGYADAVATLPPPAWAGPPADAALAAR HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AQALVAKHQCNSCHGPDLAGRDAIPRIRAQREDYLAKALAAYKSNARPGYDPAMNEVAQG HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC LSEADIKDLAAYVSRL HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA