| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170751817
Identifier: 170751817
GI number: 170751817
Start: 5756573
End: 5757847
Strand: Reverse
Name: 170751817
Synonym: Mrad2831_5447
Alternate gene names: NA
Gene position: 5757847-5756573 (Counterclockwise)
Preceding gene: 170751819
Following gene: 170751816
Centisome position: 94.74
GC content: 69.8
Gene sequence:
>1275_bases ATGACGCCGATCAGCCAGCCGATCCTGACCCGCAGCCTCACCGCCGCCCTCGCCGGACTCGGTCTCGGCCTGATGGGATC CGGCCCGGTCGCCGCGCAGGAGACGCCCGCGACCGCGGCCCCGCCGCCCAGCGTCCAGGTCGATCGCGGCTCGGCCCTCT ACGGCCGCCCCGAGGGCGGCGCCGCGGCCAAGCTCGCGCCGGTGGCCGGACCGCCGCTGGCGACCGCGGCCGCCAAGCTG CCGCTCGACAAGCTGACGGTTCCGGACGGCTTCAAGATCGAGGTCTACGCCAGCGGCCTCGCGAATGCCCGCGAAATGAC CCAGGCGCCGGACGGCACGCTGTACGTGGGCACCCGGACGGTGGGGAAGGTCTACGCCGTGCTGCCGAAGCCGGACGGCG ACGGGAAGCGCGCGGTGAAGACCATCGCGACGGGCCTGCACCGGCCGAACGGCGTCGCGTACCACGACGGCGCGCTCTAC GTCGCCGAACTCTCGAAGATCTGGCGCTACGACGACATCGCGAACCATCTCGATGGCGCGGCGAAGCCGACCCTGGTCTA CGACGACCTTCCGAAGGACGAGGCCCACGGCTGGAAGTTCATCGCCATCGGCCCGGACAACAAGCTCTACGTCCCGGTCG GCGCGCCGGGCAACATCGTGATGCCGCCGGACACCCACGCGCAGATCAGGCGGATGGACCTCGACGGCAAGAACGCCGAA GTGATCGCCCGCGGCGTGCGCAACACCGTCGGGTTCGACTGGAACCCGAAGACCAAGCAGCTCTGGTTCACCGATAACGG CCGCGACTGGGTCTCGGAGGACATCCCGAACGACGAGCTGAACGTGCTCACGGAGCCGGGCAAGCAGCATTTCGGCTATC CGTACTGCCACCAGGGCACGTTCACGGATCCGGAATACGGCTGGGGCCACGCCTGCTCGGAATTCACCGCGCCGGCGGCG CTCCTCGGCCCGCACACGGCCTCGCTCGGCCTGCGGTTCTACACCGGAACGCAGTTTCCGGAGGCCTACCGGGACGCGAT GTTCGTCGCCCGGCACGGCTCGTGGAACCGCACGACCAAGCTCGGCGGCGACGTGGTCGTGGCCAAGCCCGGACCGGACG GCAAGACCGCCGCGGTGGAGCCGTTCCTGACCGGCTTCCTTCAGGACAACAAGTATGTCGGCCGGCCGGTCGACGTGCTG GTCGCCAAGGACGGATCGCTGCTCGTTTCCGACGACTACAACGGCGCGATCTACCGCGTCAGCTACGGCCGGTGA
Upstream 100 bases:
>100_bases CTCCGCGGCGCCCGGCCCGGTCGCGCTCTCCGGCCGACCGTTGAATAAAGAGTGCAGAGCGAGCGGACGGTCCGCGGGGC CGCCCCCATCGGGAGACATC
Downstream 100 bases:
>100_bases TGCGCCGCCATCTCCGTTTGATCCGCGGGCTGGTCTATGCCCTCGGCGGGCTGCTGCTCACGGGCGCGACGCGCGCCGCC CCGGACGCGGCGATGCAGGA
Product: putative membrane-bound dehydrogenase oxidoreductase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MTPISQPILTRSLTAALAGLGLGLMGSGPVAAQETPATAAPPPSVQVDRGSALYGRPEGGAAAKLAPVAGPPLATAAAKL PLDKLTVPDGFKIEVYASGLANAREMTQAPDGTLYVGTRTVGKVYAVLPKPDGDGKRAVKTIATGLHRPNGVAYHDGALY VAELSKIWRYDDIANHLDGAAKPTLVYDDLPKDEAHGWKFIAIGPDNKLYVPVGAPGNIVMPPDTHAQIRRMDLDGKNAE VIARGVRNTVGFDWNPKTKQLWFTDNGRDWVSEDIPNDELNVLTEPGKQHFGYPYCHQGTFTDPEYGWGHACSEFTAPAA LLGPHTASLGLRFYTGTQFPEAYRDAMFVARHGSWNRTTKLGGDVVVAKPGPDGKTAAVEPFLTGFLQDNKYVGRPVDVL VAKDGSLLVSDDYNGAIYRVSYGR
Sequences:
>Translated_424_residues MTPISQPILTRSLTAALAGLGLGLMGSGPVAAQETPATAAPPPSVQVDRGSALYGRPEGGAAAKLAPVAGPPLATAAAKL PLDKLTVPDGFKIEVYASGLANAREMTQAPDGTLYVGTRTVGKVYAVLPKPDGDGKRAVKTIATGLHRPNGVAYHDGALY VAELSKIWRYDDIANHLDGAAKPTLVYDDLPKDEAHGWKFIAIGPDNKLYVPVGAPGNIVMPPDTHAQIRRMDLDGKNAE VIARGVRNTVGFDWNPKTKQLWFTDNGRDWVSEDIPNDELNVLTEPGKQHFGYPYCHQGTFTDPEYGWGHACSEFTAPAA LLGPHTASLGLRFYTGTQFPEAYRDAMFVARHGSWNRTTKLGGDVVVAKPGPDGKTAAVEPFLTGFLQDNKYVGRPVDVL VAKDGSLLVSDDYNGAIYRVSYGR >Mature_423_residues TPISQPILTRSLTAALAGLGLGLMGSGPVAAQETPATAAPPPSVQVDRGSALYGRPEGGAAAKLAPVAGPPLATAAAKLP LDKLTVPDGFKIEVYASGLANAREMTQAPDGTLYVGTRTVGKVYAVLPKPDGDGKRAVKTIATGLHRPNGVAYHDGALYV AELSKIWRYDDIANHLDGAAKPTLVYDDLPKDEAHGWKFIAIGPDNKLYVPVGAPGNIVMPPDTHAQIRRMDLDGKNAEV IARGVRNTVGFDWNPKTKQLWFTDNGRDWVSEDIPNDELNVLTEPGKQHFGYPYCHQGTFTDPEYGWGHACSEFTAPAAL LGPHTASLGLRFYTGTQFPEAYRDAMFVARHGSWNRTTKLGGDVVVAKPGPDGKTAAVEPFLTGFLQDNKYVGRPVDVLV AKDGSLLVSDDYNGAIYRVSYGR
Specific function: Unknown
COG id: COG2133
COG function: function code G; Glucose/sorbosone dehydrogenases
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR012938 - InterPro: IPR011041 [H]
Pfam domain/function: PF07995 GSDH [H]
EC number: NA
Molecular weight: Translated: 45287; Mature: 45155
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPISQPILTRSLTAALAGLGLGLMGSGPVAAQETPATAAPPPSVQVDRGSALYGRPEGG CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCC AAAKLAPVAGPPLATAAAKLPLDKLTVPDGFKIEVYASGLANAREMTQAPDGTLYVGTRT CCEEECCCCCCCHHHHHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEEEEC VGKVYAVLPKPDGDGKRAVKTIATGLHRPNGVAYHDGALYVAELSKIWRYDDIANHLDGA CCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHCCCC AKPTLVYDDLPKDEAHGWKFIAIGPDNKLYVPVGAPGNIVMPPDTHAQIRRMDLDGKNAE CCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCCCHHHEEEECCCCCCHH VIARGVRNTVGFDWNPKTKQLWFTDNGRDWVSEDIPNDELNVLTEPGKQHFGYPYCHQGT HHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCEEEEECCCHHHCCCCCCCCCC FTDPEYGWGHACSEFTAPAALLGPHTASLGLRFYTGTQFPEAYRDAMFVARHGSWNRTTK CCCCCCCCCCCHHHHCCCHHHHCCCHHHCEEEEEECCCCHHHHHCEEEEEECCCCCCCEE LGGDVVVAKPGPDGKTAAVEPFLTGFLQDNKYVGRPVDVLVAKDGSLLVSDDYNGAIYRV CCCCEEEECCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEE SYGR ECCC >Mature Secondary Structure TPISQPILTRSLTAALAGLGLGLMGSGPVAAQETPATAAPPPSVQVDRGSALYGRPEGG CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCC AAAKLAPVAGPPLATAAAKLPLDKLTVPDGFKIEVYASGLANAREMTQAPDGTLYVGTRT CCEEECCCCCCCHHHHHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEEEEEC VGKVYAVLPKPDGDGKRAVKTIATGLHRPNGVAYHDGALYVAELSKIWRYDDIANHLDGA CCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHCCCC AKPTLVYDDLPKDEAHGWKFIAIGPDNKLYVPVGAPGNIVMPPDTHAQIRRMDLDGKNAE CCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCCCHHHEEEECCCCCCHH VIARGVRNTVGFDWNPKTKQLWFTDNGRDWVSEDIPNDELNVLTEPGKQHFGYPYCHQGT HHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCEEEEECCCHHHCCCCCCCCCC FTDPEYGWGHACSEFTAPAALLGPHTASLGLRFYTGTQFPEAYRDAMFVARHGSWNRTTK CCCCCCCCCCCHHHHCCCHHHHCCCHHHCEEEEEECCCCHHHHHCEEEEEECCCCCCCEE LGGDVVVAKPGPDGKTAAVEPFLTGFLQDNKYVGRPVDVLVAKDGSLLVSDDYNGAIYRV CCCCEEEECCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEE SYGR ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]